RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 PTK7Q13308 1070 aa20.2■□□□□ 0.82
COL9A1-203ENST00000360859 GRB10Q13322 594 aa20.2■□□□□ 0.82
COL9A1-203ENST00000360859 TCTN1Q2MV58 587 aa20.2■□□□□ 0.82
COL9A1-203ENST00000360859 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
COL9A1-203ENST00000360859 PTPRSQ13332 1948 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 PRRC2BQ5JSZ5 2229 aaKnown RBP20.19■□□□□ 0.82
COL9A1-203ENST00000360859 SORBS3O60504 671 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 ZNF200P98182 395 aaPredicted RBP20.19■□□□□ 0.82
COL9A1-203ENST00000360859 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 TRIM71Q2Q1W2 868 aaKnown RBP20.19■□□□□ 0.82
COL9A1-203ENST00000360859 CELF3Q5SZQ8 465 aaKnown RBP20.19■□□□□ 0.82
COL9A1-203ENST00000360859 MYSM1Q5VVJ2 828 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 TRAF7Q6Q0C0 670 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 VSIG10LQ86VR7 867 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 IL31RAQ8NI17 732 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 WNT8BQ93098 351 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
COL9A1-203ENST00000360859 ABHD14A-ACY1A0A1B0GW23 586 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 RBAK-RBAKDNI3L0D1 243 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 LPXNO60711 386 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 HIC1Q14526 733 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 PGM5Q15124 567 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 HSDL1Q3SXM5 330 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 KCNV1Q6PIU1 500 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 SAMD3Q8N6K7 520 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 SPATA33Q96N06 139 aa20.18■□□□□ 0.82
COL9A1-203ENST00000360859 GGPS1O95749 300 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 SP2Q02086 613 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 GRM4Q14833 912 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 ZNF618Q5T7W0 954 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 HOMER1Q86YM7 354 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 COG5Q9UP83 839 aa20.17■□□□□ 0.82
COL9A1-203ENST00000360859 TCF20Q9UGU0 1960 aaKnown RBP20.17■□□□□ 0.82
COL9A1-203ENST00000360859 GJB5O95377 273 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 TGFB3P10600 412 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 UBA1P22314 1058 aaKnown RBP20.16■□□□□ 0.82
COL9A1-203ENST00000360859 TRDNQ13061 729 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 IKBKEQ14164 716 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 MBTPS1Q14703 1052 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
COL9A1-203ENST00000360859 ZFP91Q96JP5 570 aaPredicted RBP20.16■□□□□ 0.82
COL9A1-203ENST00000360859 PIGSQ96S52 555 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 RAD9AQ99638 391 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 RIOX1Q9H6W3 641 aa20.16■□□□□ 0.82
COL9A1-203ENST00000360859 MYH7BA7E2Y1 1941 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 GCOM1H8Y6P7 765 aaPredicted RBP20.15■□□□□ 0.82
COL9A1-203ENST00000360859 EFCAB14O75071 495 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 POLR2MP0CAP2 368 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
COL9A1-203ENST00000360859 CCND2P30279 289 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 TRAF1Q13077 416 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 FCHSD1Q86WN1 690 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 GDPD5Q8WTR4 605 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 HLA-CQ95604 372 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
COL9A1-203ENST00000360859 C16orf70Q9BSU1 422 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 SENP2Q9HC62 589 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 RAPGEFL1Q9UHV5 662 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 COL4A4P53420 1690 aaPredicted RBP20.15■□□□□ 0.82
COL9A1-203ENST00000360859 BDP1A6H8Y1 2624 aa20.15■□□□□ 0.82
COL9A1-203ENST00000360859 IFIT3O14879 490 aaKnown RBP20.14■□□□□ 0.81
COL9A1-203ENST00000360859 CYTH3O43739 400 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 LGR5O75473 907 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 CYP21A2P08686 494 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 PDE4AP27815 886 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 SERINC5Q86VE9 423 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 MLXIPQ9HAP2 919 aa20.14■□□□□ 0.81
COL9A1-203ENST00000360859 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
COL9A1-203ENST00000360859 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 THPOP40225 353 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 ERVK-21P61565 698 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 PTH1RQ03431 593 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 FAM117BQ6P1L5 589 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 BCAS3Q9H6U6 928 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 SUGCTQ9HAC7 445 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 LMCD1Q9NZU5 365 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 MTUS1Q9ULD2 1270 aa20.13■□□□□ 0.81
COL9A1-203ENST00000360859 NCOR1O75376 2440 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 EMSYQ7Z589 1322 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 LINC01553A4QN01 128 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 H3BRB1 525 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 TROAPQ12815 778 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL9A1-203ENST00000360859 TGS1Q96RS0 853 aaKnown RBP20.12■□□□□ 0.81
COL9A1-203ENST00000360859 TUT1Q9H6E5 874 aaKnown RBP20.12■□□□□ 0.81
COL9A1-203ENST00000360859 TAF6LQ9Y6J9 622 aa20.12■□□□□ 0.81
COL9A1-203ENST00000360859 ERICH2A1L162 156 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 C17orf102A2RUQ5 167 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 HOXC8P31273 242 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
COL9A1-203ENST00000360859 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
COL9A1-203ENST00000360859 WTAPQ15007 396 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 DBF4BQ8NFT6 615 aa20.11■□□□□ 0.81
COL9A1-203ENST00000360859 RUFY2Q8WXA3 655 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms