RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CHPF2Q9P2E5 772 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 PPP1R1BQ9UD71 204 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ZNHIT2Q9UHR6 403 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 HERC5Q9UII4 1024 aaKnown RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 FAM205AQ6ZU69 1335 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 GOLGA6L10A0A0M3HER8 536 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 FAM187AA6NFU0 413 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 CCT8L1PA6NM43 557 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 EXOC3O60645 756 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 KCNC4Q03721 635 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 UAP1Q16222 522 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 RIBC1Q8N443 379 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 LRRC45Q96CN5 670 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 FOXP3Q9BZS1 431 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ZDHHC18Q9NUE0 388 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 TRMT1Q9NXH9 659 aaKnown RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ZRANB1Q9UGI0 708 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ODF2LQ9ULJ1 636 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 POLIQ9UNA4 740 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 PVALEFA0A1B0GWK0 134 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 DNAJC6O75061 913 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 AGTP01019 485 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ATP1A1P05023 1023 aaKnown RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ABHD2P08910 425 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 CALM1P0DP23 149 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 CALM2P0DP24 149 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 CALM3P0DP25 149 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ATF7P17544 494 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ATP6V1C1P21283 382 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 ME1P48163 572 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 SPCS2Q15005 226 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 KLHDC7AQ5VTJ3 777 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 CCDC70Q6NSX1 233 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 IRGCQ6NXR0 463 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 NCAPG2Q86XI2 1143 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 TSEN2Q8NCE0 465 aaKnown RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 MICAL1Q8TDZ2 1067 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 JAKMIP2Q96AA8 810 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 TLR10Q9BXR5 811 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 TLR7Q9NYK1 1049 aaKnown RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 WDR35Q9P2L0 1181 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 SUCLA2Q9P2R7 463 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-201ENST00000359785 STK24Q9Y6E0 443 aa4.99□□□□□ -1.61
PTPN22-201ENST00000359785 SF3B1O75533 1304 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 A0A1B0GVL5 298 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 M0R2C6 588 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 DNM1LO00429 736 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZNF263O14978 683 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 LINGO3P0C6S8 592 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 CCDC166P0CW27 439 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 EZRP15311 586 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 TSHRP16473 764 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 MARCKSP29966 332 aaPredicted RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 TNNT3P45378 269 aaPredicted RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PPP2R2AP63151 447 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 LRRC63Q05C16 580 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 BMT2Q1RMZ1 405 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 TBC1D25Q3MII6 688 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 CEP85LQ5SZL2 805 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 OR52E8Q6IFG1 317 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 HOMER1Q86YM7 354 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 BCAS4Q8TDM0 211 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 RSPH1Q8WYR4 309 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 SHISA4Q96DD7 197 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZNF570Q96NI8 536 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 POLR3CQ9BUI4 534 aaPredicted RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 SPATS2LQ9NUQ6 558 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZNF652Q9Y2D9 606 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PAPPA2Q9BXP8 1791 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 UBE4BO95155 1302 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PCDH11XQ9BZA7 1347 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 BICDL2A1A5D9 508 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PI4KAP2A4QPH2 592 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZBED4O75132 1171 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 CPA1P15085 419 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ATF3P18847 181 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 RFX1P22670 979 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 SERPINB8P50452 374 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZNF844Q08AG5 666 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PNOCQ13519 176 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 DHX34Q14147 1143 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PKN1Q16512 942 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 IMMTQ16891 758 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PASD1Q8IV76 773 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PI4KAP1Q8N8J0 262 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 RNPC3Q96LT9 517 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 CEP63Q96MT8 703 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 DUSP9Q99956 384 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 FSD1Q9BTV5 496 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 UBN1Q9NPG3 1134 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 NOP53Q9NZM5 478 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 PCYOX1Q9UHG3 505 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 MAP3K2Q9Y2U5 619 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 LEMD3Q9Y2U8 911 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 ZNF532Q9HCE3 1301 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 IRS2Q9Y4H2 1338 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 DICER1Q9UPY3 1922 aaKnown RBP4.98□□□□□ -1.61
PTPN22-201ENST00000359785 TRIM64CA6NLI5 447 aa4.98□□□□□ -1.61
PTPN22-201ENST00000359785 HSF2BPO75031 334 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms