RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TRIB2Q92519 343 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 TNPO1Q92973 898 aaKnown RBP14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 ABHD16BQ9H3Z7 469 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 VTA1Q9NP79 307 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 TFIP11Q9UBB9 837 aaKnown RBP14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 DDX25Q9UHL0 483 aaKnown RBP14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 CLIC4Q9Y696 253 aa14.08□□□□□ -0.16
NIF3L1-201ENST00000359683 RBM47A0AV96 593 aaKnown RBP14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 SPATA31C2B4DYI2 1134 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 SLC37A4O43826 429 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 ADCY3O60266 1144 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 ARP10275 920 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 CYP2C19P33261 490 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 MCM7P33993 719 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 SETQ01105 290 aaPredicted RBP14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 PRR16Q569H4 304 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 MFSD14CQ5VZR4 134 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 TAPT1Q6NXT6 567 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 POLR3EQ9NVU0 708 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 NRBP1Q9UHY1 535 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 CFAP45Q9UL16 551 aa14.07□□□□□ -0.16
NIF3L1-201ENST00000359683 LRRC37A2A6NM11 1700 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 MYH15Q9Y2K3 1946 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 BMP15O95972 392 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 TGFB3P10600 412 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 SEMA3FQ13275 785 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 ACVR2BQ13705 512 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 PTPAQ15257 358 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 EEPD1Q7L9B9 569 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 CDHR1Q96JP9 859 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 MTMR9Q96QG7 549 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 TMEM60Q9H2L4 133 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 PTCH2Q9Y6C5 1203 aa14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 MORC2Q9Y6X9 1032 aaPredicted RBP14.06□□□□□ -0.16
NIF3L1-201ENST00000359683 TBX3O15119 743 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 MSH4O15457 936 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 FIBPO43427 364 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 NEMFO60524 1076 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 ELNP15502 786 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 PTGDRQ13258 359 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 MTMR1Q13613 665 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 SLC39A14Q15043 492 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 PRAMEF19Q5SWL8 479 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 KCNV1Q6PIU1 500 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 FBXO16Q8IX29 292 aaPredicted RBP14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 ETNPPLQ8TBG4 499 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 HAS1Q92839 578 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 PDGFCQ9NRA1 345 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 RCOR1Q9UKL0 485 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 KIAA1217Q5T5P2 1943 aa14.05□□□□□ -0.16
NIF3L1-201ENST00000359683 LAD1O00515 517 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 YEATS4O95619 227 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 HMGCRP04035 888 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 KRT85P78386 507 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 ARMC5Q96C12 935 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 SENP7Q9BQF6 1050 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 AGO4Q9HCK5 861 aaKnown RBP14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 DDX41Q9UJV9 622 aaKnown RBP14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 ATP9AO75110 1047 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 OR52Z1P0C646 297 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 GRK4P32298 578 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 SP2Q02086 613 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 CEBPZQ03701 1054 aaKnown RBP14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 CACNB2Q08289 660 aaPredicted RBP14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 TRIM32Q13049 653 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 CALCRLQ16602 461 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 MAP3K21Q5TCX8 1036 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 TRPV1Q8NER1 839 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 SLC5A5Q92911 643 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 TCHHQ07283 1943 aa14.04□□□□□ -0.16
NIF3L1-201ENST00000359683 IPO5O00410 1097 aaKnown RBP14.03□□□□□ -0.16
NIF3L1-201ENST00000359683 DHX15O43143 795 aaKnown RBP14.03□□□□□ -0.16
NIF3L1-201ENST00000359683 ARIH2O95376 493 aa14.03□□□□□ -0.16
NIF3L1-201ENST00000359683 BAG4O95429 457 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms