RNA–Protein interactions for RNA: ENST00000358536.8

PLXNB1-202, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,308 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-202ENST00000358536 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
PLXNB1-202ENST00000358536 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
PLXNB1-202ENST00000358536 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 BNIP3LO60238 219 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 GFPT2O94808 682 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 TTC30BQ8N4P2 665 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 LRRC4Q9HBW1 653 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 TOM1L1O75674 476 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 ARL4AP40617 200 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 KRT33BQ14525 404 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 MTERF2Q49AM1 385 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SLC17A8Q8NDX2 589 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 GDAP1Q8TB36 358 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 DAAM1Q9Y4D1 1078 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SNCBQ16143 134 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 PRKAG2Q9UGJ0 569 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 CD58P19256 250 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 PLTPP55058 493 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 TRIM11Q96F44 468 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 PPP1R13BQ96KQ4 1090 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 TLK1Q9UKI8 766 aa16.61■□□□□ 0.25
PLXNB1-202ENST00000358536 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 RPSAP08865 295 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 GAP43P17677 238 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ETF1P62495 437 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ANKRD20A4Q4UJ75 823 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ANKRD20A8PQ5CZ79 823 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ANKRD20A2Q5SQ80 823 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 GPATCH4Q5T3I0 446 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ANKRD20A1Q5TYW2 823 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 MED7O43513 233 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 MARK3P27448 753 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 SOX5P35711 763 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 XDHP47989 1333 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 IFT88Q13099 833 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 PKP1Q13835 747 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 FAM133AQ8N9E0 248 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 STAT2P52630 851 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 COA7Q96BR5 231 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 GCNT4Q9P109 453 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 G3BP2Q9UN86 482 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 PDE8BO95263 885 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 DNAJC24Q6P3W2 148 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 PDCD7Q8N8D1 485 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 CCDC197Q8NCU1 140 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 DEPDC1BQ8WUY9 529 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 WDR91A4D1P6 747 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 LAD1O00515 517 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 EVI5O60447 810 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 PPP4R4Q6NUP7 873 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 MAGEF1Q9HAY2 307 aa16.6■□□□□ 0.25
PLXNB1-202ENST00000358536 SLC8A1P32418 973 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 PEX19P40855 299 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 EPHB1P54762 984 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 EXOC8Q8IYI6 725 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 JPH2Q9BR39 696 aaPredicted RBP16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 KRT82Q9NSB4 513 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 GPT2Q8TD30 523 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 GANCQ8TET4 914 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 P2RX5Q93086 422 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.59■□□□□ 0.254e-7■■□□□ 13.1
PLXNB1-202ENST00000358536 CCDC138Q96M89 665 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 STK17AQ9UEE5 414 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 INPP5FQ9Y2H2 1132 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 ZNF233A6NK53 670 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 MOCS3O95396 460 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 OR6B2Q6IFH4 312 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 SEMA3EO15041 775 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 SRGAP2CP0DJJ0 459 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 MED4Q9NPJ6 270 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 WDR17Q8IZU2 1322 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 DDIT3P35638 169 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
PLXNB1-202ENST00000358536 SPOPLQ6IQ16 392 aa16.58■□□□□ 0.25
PLXNB1-202ENST00000358536 FAM8A1Q9UBU6 413 aa16.58■□□□□ 0.25
PLXNB1-202ENST00000358536 RNF139Q8WU17 664 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms