RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DNAJC18Q9H819 358 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 RIC8AQ9NPQ8 531 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 ZNF112Q9UJU3 913 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 MRFAP1Q9Y605 127 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 TRIM49BA6NDI0 452 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 PSMA7O14818 248 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 FANCGO15287 622 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 PPP1R11O60927 126 aaPredicted RBP15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 GYPCP04921 128 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 CASP14P31944 242 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 TXKP42681 527 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 FAM193AP78312 1265 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 ATP2B2Q01814 1243 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 TTBK2Q6IQ55 1244 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 CALML4Q96GE6 196 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 PI4KBQ9UBF8 816 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 SNCAIPQ9Y6H5 919 aa15.96■□□□□ 0.15
NIPAL3-203ENST00000358028 ATP8B1O43520 1251 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 EDIL3O43854 480 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TBC1D12O60347 775 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TDP2O95551 362 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 GJA5P36382 358 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TUBB4BP68371 445 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 LRRN4CLQ8ND94 238 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 NOC3LQ8WTT2 800 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 MTMR8Q96EF0 704 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 SLC10A4Q96EP9 437 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 DHTKD1Q96HY7 919 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 WDR24Q96S15 920 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 CARD6Q9BX69 1037 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TRIM9Q9C026 710 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 THAP9Q9H5L6 903 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 EXOC1Q9NV70 894 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 CSADQ9Y600 493 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 SOWAHDA6NJG2 315 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 UNCXA6NJT0 531 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 SLC37A4O43826 429 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 EEF1GP26641 437 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 CLK2P49760 499 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 AMPD3Q01432 767 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 MTF1Q14872 753 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 RAD9BQ6WBX8 426 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 IRF2BP1Q8IU81 584 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 GPR161Q8N6U8 529 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 WNK4Q96J92 1243 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 DESI2Q9BSY9 194 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 BEGAINQ9BUH8 593 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 LRWD1Q9UFC0 647 aa15.95■□□□□ 0.14
NIPAL3-203ENST00000358028 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 ZBTB5O15062 677 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 CA12O43570 354 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 KIF5CO60282 957 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 SLC16A2P36021 539 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 PPP1R2P41236 205 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 FXR1P51114 621 aaKnown RBP eCLIP15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 CLCN6P51797 869 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 ASIC1P78348 528 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 PPP2R3AQ06190 1150 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 PDE4DQ08499 809 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 GRB10Q13322 594 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 RRP1BQ14684 758 aaKnown RBP15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 UBE2SQ16763 222 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 SPRYD7Q5W111 196 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 CREBRFQ8IUR6 639 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 CUL5Q93034 780 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 OPTNQ96CV9 577 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 ZNF446Q9NWS9 450 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 STK17AQ9UEE5 414 aa15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 HERC5Q9UII4 1024 aaKnown RBP15.94■□□□□ 0.14
NIPAL3-203ENST00000358028 MRPL12P52815 198 aaKnown RBP15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 TTI2Q6NXR4 508 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 CYP26C1Q6V0L0 522 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 RABGGTAQ92696 567 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 PNMA5Q96PV4 448 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 RAB34Q9BZG1 259 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 MRPL44Q9H9J2 332 aaKnown RBP15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 MYO1AQ9UBC5 1043 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 PRDM4Q9UKN5 801 aa15.93■□□□□ 0.14
NIPAL3-203ENST00000358028 A0A1W2PQC6 194 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 LGALS16A8MUM7 142 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 CCNE1P24864 410 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 UBXN1Q04323 297 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 PDIA5Q14554 519 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 NOL9Q5SY16 702 aaKnown RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 PPP4R3AQ6IN85 833 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 SV2BQ7L1I2 683 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 RSRC2Q7L4I2 434 aaKnown RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 DCAF4Q8WV16 495 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 P2RX5Q93086 422 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 MKL1Q969V6 931 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms