RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 XRRA1Q6P2D8 792 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 C11orf57Q6ZUT1 292 aaPredicted RBP19.19■□□□□ 0.66
TPM1-205ENST00000357980 FAM200AQ8TCP9 573 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 SNX29Q8TEQ0 813 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 GTF3C2Q8WUA4 911 aaPredicted RBP19.19■□□□□ 0.66
TPM1-205ENST00000357980 CALML4Q96GE6 196 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 PNMA5Q96PV4 448 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 PLIN2Q99541 437 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 MAGEF1Q9HAY2 307 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
TPM1-205ENST00000357980 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 BIN1O00499 593 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 SLC25A27O95847 323 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 CYP2C8P10632 490 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 NLRP12P59046 1061 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 ZRSR1Q15695 479 aaKnown RBP19.18■□□□□ 0.66
TPM1-205ENST00000357980 DPCR1Q3MIW9 517 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 TMEM119Q4V9L6 283 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 NSUN6Q8TEA1 469 aaKnown RBP19.18■□□□□ 0.66
TPM1-205ENST00000357980 GPBP1L1Q9HC44 474 aaPredicted RBP19.18■□□□□ 0.66
TPM1-205ENST00000357980 SLC26A4O43511 780 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 ERCC3P19447 782 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 COPB2P35606 906 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 Q3C1V9 767 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 SAPCD2Q86UD0 394 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 VSIG10LQ86VR7 867 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 NCAPG2Q86XI2 1143 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 RASAL3Q86YV0 1011 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 STAMQ92783 540 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 SMARCE1Q969G3 411 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 R3HDMLQ9H3Y0 253 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 JADE2Q9NQC1 790 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 KCNH7Q9NS40 1196 aa19.18■□□□□ 0.66
TPM1-205ENST00000357980 KIF3CO14782 793 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 NR3C2P08235 984 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 CASP1P29466 404 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ERVK-24P63145 666 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 PPP2R5CQ13362 524 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ECM1Q16610 540 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 LRCH2Q5VUJ6 765 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ANKRD35Q8N283 1001 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 FAM43AQ8N2R8 423 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 PTPN18Q99952 460 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ZNF577Q9BSK1 485 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 WDR11Q9BZH6 1224 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 BLOC1S4Q9NUP1 217 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 STK17AQ9UEE5 414 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 MAN1B1Q9UKM7 699 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 LRRC37A2A6NM11 1700 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 ASTN1O14525 1302 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 KDM3AQ9Y4C1 1321 aa19.17■□□□□ 0.66
TPM1-205ENST00000357980 IPO5O00410 1097 aaKnown RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 GTPBP6O43824 516 aaPredicted RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 SMC2O95347 1197 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 BMP6P22004 513 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 CCND2P30279 289 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 ZNF165P49910 485 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 B3GNT9Q6UX72 402 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 ZNFX1Q9P2E3 1918 aaKnown RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 TESPA1A2RU30 521 aaPredicted RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 MYCLP12524 364 aaPredicted RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 MTMR1Q13613 665 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 CUL4BQ13620 913 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 TRIML1Q8N9V2 468 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 SMCR8Q8TEV9 937 aaPredicted RBP19.16■□□□□ 0.66
TPM1-205ENST00000357980 CDK5RAP3Q96JB5 506 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 GSDMAQ96QA5 445 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 RIT2Q99578 217 aa19.16■□□□□ 0.66
TPM1-205ENST00000357980 GAS7O60861 476 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 MYL1P05976 194 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 CCT6AP40227 531 aaKnown RBP19.15■□□□□ 0.66
TPM1-205ENST00000357980 CNTN2Q02246 1040 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 MORC3Q14149 939 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 HAUS3Q68CZ6 603 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 NCAPH2Q6IBW4 605 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 KCNK18Q7Z418 384 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 INPP4AQ96PE3 977 aaPredicted RBP19.15■□□□□ 0.66
TPM1-205ENST00000357980 NT5C3AQ9H0P0 336 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 AGO4Q9HCK5 861 aaKnown RBP19.15■□□□□ 0.66
TPM1-205ENST00000357980 STK24Q9Y6E0 443 aa19.15■□□□□ 0.66
TPM1-205ENST00000357980 EML1O00423 815 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 MED24O75448 989 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 RPA1P27694 616 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.65
TPM1-205ENST00000357980 UVSSAQ2YD98 709 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 ISM2Q6H9L7 571 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 FAM133AQ8N9E0 248 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 SHCBP1Q8NEM2 672 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 ERMNQ8TAM6 284 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 IWS1Q96ST2 819 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 BLZF1Q9H2G9 400 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 MROH8Q9H579 483 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 POTEB3A0JP26 581 aa19.14■□□□□ 0.65
TPM1-205ENST00000357980 DHX15O43143 795 aaKnown RBP19.14■□□□□ 0.65
TPM1-205ENST00000357980 SPATA31C1P0DKV0 1188 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms