RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SALL4Q9UJQ4 1053 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 HYOU1Q9Y4L1 999 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC1A4P43007 532 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 EPHB4P54760 987 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 KCNB1Q14721 858 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 E2F5Q15329 346 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM84BQ96KN1 310 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZIM3Q96PE6 472 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 TTYH3Q9C0H2 523 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ATP6V0A4Q9HBG4 840 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 LRP6O75581 1613 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ENO4A6NNW6 628 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 MARCH6O60337 910 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 RASSF9O75901 435 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 HEXIM1O94992 359 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 TCP1P17987 556 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 SNX1Q13596 522 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 TTMPQ5BVD1 217 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 RPUSD2Q8IZ73 545 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZNF444Q8N0Y2 327 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 KLHL23Q8NBE8 558 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 NSUN4Q96CB9 384 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 KRT12Q99456 494 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZHX3Q9H4I2 956 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 VCPKMTQ9H867 229 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 GOLGA8KD6RF30 607 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 GLI1P08151 1106 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 OR52Z1P0C646 297 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM153BP0C7A2 387 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 AMPD3Q01432 767 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 EHHADHQ08426 723 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 SF3A3Q12874 501 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 TRADDQ15628 312 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM153CQ494X1 144 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 ERFEQ4G0M1 354 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 VWA3BQ502W6 1294 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 HAUS3Q68CZ6 603 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 CNNM4Q6P4Q7 775 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 KIAA0895Q8NCT3 520 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 CELF1Q92879 486 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 MTMR8Q96EF0 704 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC40A1Q9NP59 571 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 BATF3Q9NR55 127 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM153AQ9UHL3 310 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 PLAGL2Q9UPG8 496 aa9.07□□□□□ -0.96
CDC42SE1-201ENST00000357235 MYH6P13533 1939 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 XIRP1Q702N8 1843 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SRCAPQ6ZRS2 3230 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SMCO2A6NFE2 343 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 A6NNZ2 444 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CYTH3O43739 400 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC8A1P32418 973 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PRPHP41219 470 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SEC24CP53992 1094 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PLCB4Q15147 1175 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 TUBB8Q3ZCM7 444 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SOGA3Q5TF21 947 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 TLDC1Q6P9B6 456 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 DNAAF5Q86Y56 855 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 GLIS3Q8NEA6 775 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 GRIN2DO15399 1336 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 DCCP43146 1447 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 GOLGA6L7A0A1B0GV03 622 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 KLRF2D3W0D1 207 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PDHBP11177 359 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CFAP221Q4G0U5 840 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 SV2BQ7L1I2 683 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 YTHDF3Q7Z739 585 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 NELFCDQ8IXH7 590 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCDC13Q8IYE1 715 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 MMGT1Q8N4V1 131 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 LMBR1Q8WVP7 490 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 GJA10Q969M2 543 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCDC114Q96M63 670 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCSER1Q9C0I3 900 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 GOLPH3Q9H4A6 298 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 PPANQ9NQ55 473 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 MINPP1Q9UNW1 487 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 ALS2Q96Q42 1657 aa9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 BAZ2AQ9UIF9 1905 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-201ENST00000357235 POTEMA6NI47 508 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TRAF5O00463 557 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ATP2C2O75185 946 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 PALMO75781 387 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms