RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 CNNM4Q6P4Q7 775 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 ERGIC2Q96RQ1 377 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 PLAGL2Q9UPG8 496 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 H0YHG0 523 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 SERPINB2P05120 415 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 ACTN1P12814 892 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 PSMC6P62333 389 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 RAD54LQ92698 747 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 AK8Q96MA6 479 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 BICDL2A1A5D9 508 aa16.89■□□□□ 0.3
PTBP1-203ENST00000356948 LAD1O00515 517 aa16.89■□□□□ 0.3
PTBP1-203ENST00000356948 SELENOOQ9BVL4 669 aa16.89■□□□□ 0.3
PTBP1-203ENST00000356948 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.3
PTBP1-203ENST00000356948 TRAF5O00463 557 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 LDHCP07864 332 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 GYS1P13807 737 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 POLD1P28340 1107 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 NAP1L1P55209 391 aaKnown RBP16.89■□□□□ 0.29
PTBP1-203ENST00000356948 DDR1Q08345 913 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 GALNT17Q6IS24 598 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 DNAJC19Q96DA6 116 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
PTBP1-203ENST00000356948 JRKLQ9Y4A0 524 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-203ENST00000356948 NOL4O94818 638 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 FTCDO95954 541 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 EP400NLQ6ZTU2 488 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
PTBP1-203ENST00000356948 DDX25Q9UHL0 483 aaKnown RBP16.89■□□□□ 0.29
PTBP1-203ENST00000356948 COASYQ13057 564 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 SPA17Q15506 151 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 TDRD12Q587J7 1177 aaKnown RBP16.88■□□□□ 0.29
PTBP1-203ENST00000356948 IPO7O95373 1038 aaKnown RBP16.88■□□□□ 0.29
PTBP1-203ENST00000356948 IL1R1P14778 569 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 HGSNATQ68CP4 663 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 SNX12Q9UMY4 172 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 MARCH6O60337 910 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 POLR2FP61218 127 aaKnown RBP16.88■□□□□ 0.29
PTBP1-203ENST00000356948 BTAF1O14981 1849 aa16.88■□□□□ 0.29
PTBP1-203ENST00000356948 POTEFA5A3E0 1075 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 POTEGQ6S5H5 508 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 CCNI2Q6ZMN8 369 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 TSEN2Q8NCE0 465 aaKnown RBP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 RBM12Q9NTZ6 932 aaKnown RBP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 CYP2W1Q8TAV3 490 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 OSBPL9Q96SU4 736 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 SHMT1P34896 483 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 MAGEA1P43355 309 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 GABPAQ06546 454 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 ICE2Q659A1 982 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 LRRC31Q6UY01 552 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 SND1Q7KZF4 910 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTBP1-203ENST00000356948 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
PTBP1-203ENST00000356948 MYL1P05976 194 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 ACTN2P35609 894 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 AMPD3Q01432 767 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 KCNA1Q09470 495 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 TLR10Q9BXR5 811 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 ADAMTSL1Q8N6G6 1762 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 SFI1A8K8P3 1242 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 MAN2A1Q16706 1144 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 CCDC170Q8IYT3 715 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 USP21Q9UK80 565 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 MED24O75448 989 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
PTBP1-203ENST00000356948 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 LSM14BQ9BX40 385 aaKnown RBP16.86■□□□□ 0.29
PTBP1-203ENST00000356948 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 CUEDC2Q9H467 287 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
PTBP1-203ENST00000356948 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTBP1-203ENST00000356948 EHHADHQ08426 723 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 USH1GQ495M9 461 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 FAM133AQ8N9E0 248 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTBP1-203ENST00000356948 ADAMTS1Q9UHI8 967 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 SMCHD1A6NHR9 2005 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 TULP2O00295 520 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 FAM153BP0C7A2 387 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 CYP4A11Q02928 519 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 VPS72Q15906 364 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 FAM153CQ494X1 144 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms