RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 FAM126BQ8IXS8 530 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 AFG1LQ8WV93 481 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 GPRASP2Q96D09 838 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 KATNAL1Q9BW62 490 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 C6orf50Q9HD87 102 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 PCDHA6Q9UN73 950 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 PCDHA8Q9Y5H6 950 aa23.35■■□□□ 1.33
CHRD-203ENST00000356534 TANC1Q9C0D5 1861 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 TRIP12Q14669 1992 aaPredicted RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 CDKL5O76039 1030 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 GGPS1O95749 300 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 RAG1P15918 1043 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 UBA1P22314 1058 aaKnown RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 MDM2Q00987 491 aaPredicted RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 PTPN11Q06124 597 aaPredicted RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 FAAP100Q0VG06 881 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 CELF3Q5SZQ8 465 aaKnown RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 TYW1BQ6NUM6 668 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 FAM177A1Q8N128 213 aaPredicted RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 GIMAP8Q8ND71 665 aaPredicted RBP23.34■■□□□ 1.33
CHRD-203ENST00000356534 BICD2Q8TD16 824 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 PHKBQ93100 1093 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 SLC26A6Q9BXS9 759 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
CHRD-203ENST00000356534 SSRP1Q08945 709 aaKnown RBP23.33■■□□□ 1.33
CHRD-203ENST00000356534 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
CHRD-203ENST00000356534 NFRKBQ6P4R8 1299 aa23.33■■□□□ 1.33
CHRD-203ENST00000356534 SENP7Q9BQF6 1050 aa23.33■■□□□ 1.33
CHRD-203ENST00000356534 ANO3Q9BYT9 981 aa23.33■■□□□ 1.33
CHRD-203ENST00000356534 ZMYND12Q9H0C1 365 aa23.33■■□□□ 1.33
CHRD-203ENST00000356534 NCOA5Q9HCD5 579 aaKnown RBP23.33■■□□□ 1.33
CHRD-203ENST00000356534 TRIM43BA6NCK2 446 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 MAFGO15525 162 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 DEXIO95424 95 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 SUPT20HL2P0C7V6 817 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 TDHQ8IZJ6 230 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 TRIM43Q96BQ3 446 aaPredicted RBP23.32■■□□□ 1.32
CHRD-203ENST00000356534 SPATA33Q96N06 139 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 SLKQ9H2G2 1235 aaPredicted RBP23.32■■□□□ 1.32
CHRD-203ENST00000356534 SH3GLB2Q9NR46 395 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 TBX21Q9UL17 535 aa23.32■■□□□ 1.32
CHRD-203ENST00000356534 MYH9P35579 1960 aaKnown RBP23.31■■□□□ 1.32
CHRD-203ENST00000356534 SPATA31C2B4DYI2 1134 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 CD4P01730 458 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 HOXD8P13378 290 aaPredicted RBP23.31■■□□□ 1.32
CHRD-203ENST00000356534 CLK2P49760 499 aaKnown RBP23.31■■□□□ 1.32
CHRD-203ENST00000356534 PSMC6P62333 389 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 PKN1Q16512 942 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 METTL7BQ6UX53 244 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 SH3RF1Q7Z6J0 888 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 REXO1Q8N1G1 1221 aaKnown RBP23.31■■□□□ 1.32
CHRD-203ENST00000356534 RTEL1Q9NZ71 1219 aa23.31■■□□□ 1.32
CHRD-203ENST00000356534 WDR81Q562E7 1941 aa23.3■■□□□ 1.32
CHRD-203ENST00000356534 NOP56O00567 594 aaKnown RBP23.3■■□□□ 1.32
CHRD-203ENST00000356534 PPFIA4O75335 1185 aa23.3■■□□□ 1.32
CHRD-203ENST00000356534 STK3Q13188 491 aa23.3■■□□□ 1.32
CHRD-203ENST00000356534 C8orf34Q49A92 452 aa23.3■■□□□ 1.32
CHRD-203ENST00000356534 GRIN2DO15399 1336 aa23.3■■□□□ 1.32
CHRD-203ENST00000356534 TIMP1P01033 207 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 SREBF1P36956 1147 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 AK2P54819 239 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 MTMR1Q13613 665 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 NBPF20Q3BBV1 942 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 BADQ92934 168 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 ZFP91Q96JP5 570 aaPredicted RBP23.29■■□□□ 1.32
CHRD-203ENST00000356534 UBIAD1Q9Y5Z9 338 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 STK36Q9NRP7 1315 aa23.29■■□□□ 1.32
CHRD-203ENST00000356534 PFKFB2O60825 505 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 F2P00734 622 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 SP2Q02086 613 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 FPGSQ05932 587 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 SEMA3FQ13275 785 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 HSDL1Q3SXM5 330 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 SESTD1Q86VW0 696 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 JADE2Q9NQC1 790 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
CHRD-203ENST00000356534 B4GALT4O60513 344 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 SEC24BO95487 1268 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 NEK4P51957 841 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 MFSD5Q6N075 450 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 TMEM199Q8N511 208 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 C22orf23Q9BZE7 217 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 HIPK3Q9H422 1215 aa23.27■■□□□ 1.32
CHRD-203ENST00000356534 UPF2Q9HAU5 1272 aaKnown RBP23.27■■□□□ 1.32
CHRD-203ENST00000356534 RANBP2P49792 3224 aaKnown RBP23.26■■□□□ 1.31
CHRD-203ENST00000356534 XBP1P17861 261 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 PSEN2P49810 448 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 SCRN1Q12765 414 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 PPIGQ13427 754 aaKnown RBP eCLIP23.26■■□□□ 1.319e-10■■■■□ 20.5
CHRD-203ENST00000356534 CYFIP1Q7L576 1253 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 MXRA8Q9BRK3 442 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 LARP6Q9BRS8 491 aaKnown RBP23.26■■□□□ 1.31
CHRD-203ENST00000356534 VPS54Q9P1Q0 977 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 TPCN1Q9ULQ1 816 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 NOD1Q9Y239 953 aa23.26■■□□□ 1.31
CHRD-203ENST00000356534 ITGB5P18084 799 aa23.25■■□□□ 1.31
CHRD-203ENST00000356534 ZNF76P36508 570 aa23.25■■□□□ 1.31
CHRD-203ENST00000356534 NLRP5P59047 1200 aa23.25■■□□□ 1.31
CHRD-203ENST00000356534 ARHGAP4P98171 946 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms