RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
CAPN3-204ENST00000356316 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-204ENST00000356316 OPLAHO14841 1288 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 SORBS3O60504 671 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 GGPS1O95749 300 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 MYOGP15173 224 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 SELPP16109 830 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 MCM5P33992 734 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 TROAPQ12815 778 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 LRRC8DQ7L1W4 858 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 KAT2BQ92831 832 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
CAPN3-204ENST00000356316 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 HDAC6Q9UBN7 1215 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
CAPN3-204ENST00000356316 GTF2IRD1Q9UHL9 959 aa12.32□□□□□ -0.44
CAPN3-204ENST00000356316 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
CAPN3-204ENST00000356316 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
CAPN3-204ENST00000356316 STAM2O75886 525 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 GNAQP50148 359 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
CAPN3-204ENST00000356316 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 VCANP13611 3396 aa12.31□□□□□ -0.44
CAPN3-204ENST00000356316 CHD7Q9P2D1 2997 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 PRC1O43663 620 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CYTH3O43739 400 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-204ENST00000356316 TLL1O43897 1013 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 DDAH1O94760 285 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 F2P00734 622 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CA3P07451 260 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CALM1P0DP23 149 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CALM2P0DP24 149 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CALM3P0DP25 149 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 CKBP12277 381 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 PTK7Q13308 1070 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 IKBKEQ14164 716 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 NEDD9Q14511 834 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 MB21D2Q8IYB1 491 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-204ENST00000356316 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 MICALL1Q8N3F8 863 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-204ENST00000356316 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
CAPN3-204ENST00000356316 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
CAPN3-204ENST00000356316 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 TRANK1O15050 2925 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 H3BRB1 525 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 HAS3O00219 553 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 EFCAB14O75071 495 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 RGS20O76081 388 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
CAPN3-204ENST00000356316 SP2Q02086 613 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 SYNE3Q6ZMZ3 975 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 IL31RAQ8NI17 732 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
CAPN3-204ENST00000356316 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 TAF6LQ9Y6J9 622 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 REV3LO60673 3130 aa12.29□□□□□ -0.44
CAPN3-204ENST00000356316 MYO9BQ13459 2157 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 FIBPO43427 364 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 GNAT1P11488 350 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 UBA1P22314 1058 aaKnown RBP12.28□□□□□ -0.44
CAPN3-204ENST00000356316 THPOP40225 353 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 ANTXR2P58335 489 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
CAPN3-204ENST00000356316 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 CYFIP1Q7L576 1253 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 NLRX1Q86UT6 975 aa12.28□□□□□ -0.44
CAPN3-204ENST00000356316 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-204ENST00000356316 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms