RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LZTS2Q9BRK4 669 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 ALG1Q9BT22 464 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 HDAC6Q9UBN7 1215 aa19.3■□□□□ 0.68
PDLIM7-201ENST00000355572 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 KPNA6O60684 536 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 F2P00734 622 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 CALM1P0DP23 149 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 CALM2P0DP24 149 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 CALM3P0DP25 149 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 PSEN2P49810 448 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 GNAQP50148 359 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 TCTN1Q2MV58 587 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 ZNF697Q5TEC3 545 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 HERVK_113Q902F9 699 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 CDX2Q99626 313 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 C16orf70Q9BSU1 422 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 PBX4Q9BYU1 374 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 STXBP5LQ9Y2K9 1186 aa19.29■□□□□ 0.68
PDLIM7-201ENST00000355572 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 SPATA31C2B4DYI2 1134 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 DNAJB2P25686 324 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 ICAM3P32942 547 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 APOBRQ0VD83 1088 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 LAMC2Q13753 1193 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 DGKDQ16760 1214 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 SESTD1Q86VW0 696 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 MYLIPQ8WY64 445 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 PGBD1Q96JS3 809 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 JAKMIP1Q96N16 626 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
PDLIM7-201ENST00000355572 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 ATP9AO75110 1047 aa19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 PTPN11Q06124 597 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 MFSD10Q14728 455 aa19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 PTGISQ16647 500 aa19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 KIAA0753Q2KHM9 967 aa19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 PSRC1Q6PGN9 363 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 GTF2IRD1Q9UHL9 959 aa19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-201ENST00000355572 KAT6AQ92794 2004 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 ZBTB43O43298 467 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 FGBP02675 491 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 IQCF3P0C7M6 154 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 ADD1P35611 737 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 TRAF1Q13077 416 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 GRIN2CQ14957 1233 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 RTN1Q16799 776 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 TRIM71Q2Q1W2 868 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 Q6ZUG5 572 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 CYFIP1Q7L576 1253 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 HEATR3Q7Z4Q2 680 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 TRIM50Q86XT4 487 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 PSTPIP2Q9H939 334 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 MYO9BQ13459 2157 aa19.26■□□□□ 0.67
PDLIM7-201ENST00000355572 WDR81Q562E7 1941 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 EYSQ5T1H1 3165 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 PPFIA3O75145 1194 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 TGFB3P10600 412 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 MYOGP15173 224 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 ITGB5P18084 799 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 RABGGTBP53611 331 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 BRF1Q92994 677 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 OSBPL7Q9BZF2 842 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 TMEM260Q9NX78 707 aa19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-201ENST00000355572 MICAL3Q7RTP6 2002 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 STXBP3O00186 592 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 LGALS2P05162 132 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 CUL5Q93034 780 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 GPR20Q99678 358 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 AGXT2Q9BYV1 514 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 PCDHA6Q9UN73 950 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 PCDHA8Q9Y5H6 950 aa19.24■□□□□ 0.67
PDLIM7-201ENST00000355572 LOXHD1Q8IVV2 1947 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 NID2Q14112 1375 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 PITPNM1O00562 1244 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 FIBPO43427 364 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 KCNA2P16389 499 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 RPS6KB1P23443 525 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 SP4Q02446 784 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 KRT32Q14532 448 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 MBTPS1Q14703 1052 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 KCNV1Q6PIU1 500 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 CYP2W1Q8TAV3 490 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 MLXIPQ9HAP2 919 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 PKD2L1Q9P0L9 805 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms