RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 LAD1O00515 517 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 BMP3P12645 472 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 PLCG1P19174 1290 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
COLCA1-201ENST00000355430 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 CTTNBP2NLQ9P2B4 639 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 EPHB4P54760 987 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 DISC1Q9NRI5 854 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 UBL4BQ8N7F7 174 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 PCDHA13Q9Y5I0 950 aa13.5□□□□□ -0.25
COLCA1-201ENST00000355430 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 GSPT2Q8IYD1 628 aaKnown RBP13.49□□□□□ -0.25
COLCA1-201ENST00000355430 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
COLCA1-201ENST00000355430 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 STAT2P52630 851 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 LARP4BQ92615 738 aaKnown RBP13.49□□□□□ -0.25
COLCA1-201ENST00000355430 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 EPB41L5Q9HCM4 733 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 DPEP1P16444 411 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 ABCB4P21439 1286 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 CCNE1P24864 410 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 NT5C2P49902 561 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 FAM26FQ5R3K3 315 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 MAEAQ7L5Y9 396 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 MYCP01106 439 aaPredicted RBP13.49□□□□□ -0.25
COLCA1-201ENST00000355430 PRCPP42785 496 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 GPSM2P81274 684 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 MECOMQ03112 1051 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 ARHGAP44Q17R89 818 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 DEPTORQ8TB45 409 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 AMFRQ9UKV5 643 aa13.49□□□□□ -0.25
COLCA1-201ENST00000355430 ANKRD65E5RJM6 399 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 HEXIM1O94992 359 aaKnown RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 XRCC5P13010 732 aaKnown RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 DDX12PQ92771 950 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 DYNLL2Q96FJ2 89 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 AK8Q96MA6 479 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 LMNB1P20700 586 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 SNX16P57768 344 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 ADAM9Q13443 819 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 MAN2A1Q16706 1144 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 JPH2Q9BR39 696 aaPredicted RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 MICALL2Q8IY33 904 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 MYO1CO00159 1063 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 HGSO14964 777 aaPredicted RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 FTCDO95954 541 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 KRT5P13647 590 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 ADAT2Q7Z6V5 191 aaKnown RBP13.48□□□□□ -0.25
COLCA1-201ENST00000355430 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 FBXO40Q9UH90 709 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 IKBKGQ9Y6K9 419 aa13.48□□□□□ -0.25
COLCA1-201ENST00000355430 KIF11P52732 1056 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 ALX1Q15699 326 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
COLCA1-201ENST00000355430 LRFN2Q9ULH4 789 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 LGALS16A8MUM7 142 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 H0YCG3 227 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 NMT2O60551 498 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 MYL1P05976 194 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 TGFB2P61812 414 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
COLCA1-201ENST00000355430 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
COLCA1-201ENST00000355430 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
COLCA1-201ENST00000355430 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 MST1RQ04912 1400 aa13.47□□□□□ -0.25
COLCA1-201ENST00000355430 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms