RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 IWS1Q96ST2 819 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PHOX2BQ99453 314 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 TAF1DQ9H5J8 278 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 BRD7Q9NPI1 651 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 TRPC6Q9Y210 931 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 URB2Q14146 1524 aaKnown RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 SH3D21A4FU49 640 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 SASH1O94885 1247 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 SFPQP23246 707 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFC1-201ENST00000349703 POLR2BP30876 1174 aaKnown RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 TERF2Q15554 542 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 CRY1Q16526 586 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 CACHD1Q5VU97 1274 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 USP21Q9UK80 565 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PTPRCP08575 1304 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 SMC2O95347 1197 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 PRKAR2BP31323 418 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 MCM7P33993 719 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 TBX4P57082 545 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 TUBB4BP68371 445 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 CHAF1BQ13112 559 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 TRPM4Q8TD43 1214 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 AARSD1Q9BTE6 412 aaKnown RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 SLC12A5Q9H2X9 1139 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 KIAA1586Q9HCI6 787 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 PDRG1Q9NUG6 133 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 RNF112Q9ULX5 631 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 CAMK2AQ9UQM7 478 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 CNPY2Q9Y2B0 182 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 DAGLAQ9Y4D2 1042 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 MAP4K5Q9Y4K4 846 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 ELP1O95163 1332 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 DCDC2CA8MYV0 355 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 ZBTB7BO15156 539 aaPredicted RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 FBXO21O94952 628 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 AGR2O95994 175 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 MYL6BP14649 208 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 HSPA4P34932 840 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 LYPD8Q6UX82 237 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 ATG16L2Q8NAA4 619 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 CTAGE1Q96RT6 745 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 DPCDQ9BVM2 203 aaPredicted RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 RBCK1Q9BYM8 510 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 IFT22Q9H7X7 185 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 SNX5Q9Y5X3 404 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 YEATS2Q9ULM3 1422 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 RPGRIP1LQ68CZ1 1315 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 ATP8B1O43520 1251 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 MAFKO60675 156 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 NLRP12P59046 1061 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 TYRO3Q06418 890 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 VEPH1Q14D04 833 aa6.57□□□□□ -1.36
RFC1-201ENST00000349703 TTC31Q49AM3 519 aaPredicted RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 MRPS23Q9Y3D9 190 aaKnown RBP6.57□□□□□ -1.36
RFC1-201ENST00000349703 FERP16591 822 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 PAPOLAP51003 745 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 BTKQ06187 659 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SLC20A2Q08357 652 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 ANGPT1Q15389 498 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 PKN3Q6P5Z2 889 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SPATS2Q86XZ4 545 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 FAM163AQ96GL9 167 aaPredicted RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 TMEM74Q96NL1 305 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SKILP12757 684 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 RPL10P27635 214 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 IRS1P35568 1242 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 POU5F1Q01860 360 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 ZBTB17Q13105 803 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 CCDC62Q6P9F0 684 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SV2BQ7L1I2 683 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 MIGA2Q7L4E1 593 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 FAM35AQ86V20 835 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 C7orf25Q9BPX7 421 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 MOV10L1Q9BXT6 1211 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 RABEP2Q9H5N1 569 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 BRMS1Q9HCU9 246 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 LRRFIP2Q9Y608 721 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 RTEL1-TNFRSF6BF6WH68 1400 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 ADCY10Q96PN6 1610 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 POLR3GO15318 223 aaPredicted RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 CTIFO43310 598 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 AARSP49588 968 aaKnown RBP eCLIP6.56□□□□□ -1.368e-6■■■■■ 52.4
RFC1-201ENST00000349703 PSEN2P49810 448 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 CLDN10P78369 228 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 VARS2Q5ST30 1063 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 RHOT1Q8IXI2 618 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 USP6NLQ92738 828 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SKA1Q96BD8 255 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 APOL6Q9BWW8 343 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 NOL6Q9H6R4 1146 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 ZNF215Q9UL58 517 aaPredicted RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 ARHGAP31Q2M1Z3 1444 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 AXIN1O15169 862 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms