RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MAMDC4Q6UXC1 1216 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 SLFN12Q8IYM2 578 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 DNAJC5GQ8N7S2 189 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 NPLOC4Q8TAT6 608 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 SLC5A5Q92911 643 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 MAML3Q96JK9 1138 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 NUDT12Q9BQG2 462 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 SLC5A4Q9NY91 659 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 CAP1Q01518 475 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 GJA10Q969M2 543 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 CSRNP2Q9H175 543 aa30.61■■■□□ 2.49
SSBP4-202ENST00000348495 GPR25O00155 361 aa30.6■■■□□ 2.49
SSBP4-202ENST00000348495 PTMSP20962 102 aa30.6■■■□□ 2.49
SSBP4-202ENST00000348495 TXKP42681 527 aa30.6■■■□□ 2.49
SSBP4-202ENST00000348495 FXR2P51116 673 aaKnown RBP eCLIP30.6■■■□□ 2.49
SSBP4-202ENST00000348495 SHC4Q6S5L8 630 aa30.6■■■□□ 2.49
SSBP4-202ENST00000348495 GOLGA6L4A6NEF3 574 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 MAFGO15525 162 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 NLRX1Q86UT6 975 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 AGO4Q9HCK5 861 aaKnown RBP30.59■■■□□ 2.49
SSBP4-202ENST00000348495 CMA1P23946 247 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 SEMA3FQ13275 785 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 ARMCX2Q7L311 632 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 IGSF22Q8N9C0 903 aa30.59■■■□□ 2.49
SSBP4-202ENST00000348495 TTC12Q9H892 705 aaPredicted RBP30.59■■■□□ 2.49
SSBP4-202ENST00000348495 LONP1P36776 959 aaKnown RBP30.58■■■□□ 2.49
SSBP4-202ENST00000348495 RGS2P41220 211 aa30.58■■■□□ 2.49
SSBP4-202ENST00000348495 RESP18Q5W5W9 173 aa30.58■■■□□ 2.49
SSBP4-202ENST00000348495 MSL3Q8N5Y2 521 aaKnown RBP30.58■■■□□ 2.49
SSBP4-202ENST00000348495 UIMC1Q96RL1 719 aa30.58■■■□□ 2.49
SSBP4-202ENST00000348495 ZNF577Q9BSK1 485 aa30.58■■■□□ 2.49
SSBP4-202ENST00000348495 MCM3APO60318 1980 aa30.58■■■□□ 2.49
SSBP4-202ENST00000348495 SPATA31C2B4DYI2 1134 aa30.57■■■□□ 2.48
SSBP4-202ENST00000348495 IPO5O00410 1097 aaKnown RBP30.57■■■□□ 2.48
SSBP4-202ENST00000348495 ICAM3P32942 547 aa30.57■■■□□ 2.48
SSBP4-202ENST00000348495 TECP42680 631 aa30.57■■■□□ 2.48
SSBP4-202ENST00000348495 GNPTABQ3T906 1256 aa30.57■■■□□ 2.48
SSBP4-202ENST00000348495 PCDHA12Q9UN75 941 aa30.57■■■□□ 2.48
SSBP4-202ENST00000348495 MARCH6O60337 910 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 PSMD10O75832 226 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 IGHA2P01877 340 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 KIF22Q14807 665 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 CDHR1Q96JP9 859 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 RIT2Q99578 217 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 APBA2Q99767 749 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 VAV3Q9UKW4 847 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 KIAA1217Q5T5P2 1943 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 PCNTO95613 3336 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 FAM237AA0A1B0GTK4 181 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 SPIRE1Q08AE8 756 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 ITGB3BPQ13352 177 aaPredicted RBP30.56■■■□□ 2.48
SSBP4-202ENST00000348495 PDIA5Q14554 519 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 SPECC1Q5M775 1068 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 GPT2Q8TD30 523 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 TINF2Q9BSI4 451 aa30.56■■■□□ 2.48
SSBP4-202ENST00000348495 SYNGAP1Q96PV0 1343 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 DHX15O43143 795 aaKnown RBP30.55■■■□□ 2.48
SSBP4-202ENST00000348495 TMEM266Q2M3C6 531 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 TPRNQ4KMQ1 711 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 USP49Q70CQ1 688 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 MRPS27Q92552 414 aaKnown RBP30.55■■■□□ 2.48
SSBP4-202ENST00000348495 AK8Q96MA6 479 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 GOLPH3LQ9H4A5 285 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 WBP1LQ9NX94 342 aa30.55■■■□□ 2.48
SSBP4-202ENST00000348495 ATP9AO75110 1047 aa30.54■■■□□ 2.48
SSBP4-202ENST00000348495 SNAI1O95863 264 aaPredicted RBP30.54■■■□□ 2.48
SSBP4-202ENST00000348495 CYP2B6P20813 491 aa30.54■■■□□ 2.48
SSBP4-202ENST00000348495 KATNBL1Q9H079 304 aa30.54■■■□□ 2.48
SSBP4-202ENST00000348495 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.54■■■□□ 2.48
SSBP4-202ENST00000348495 XRCC5P13010 732 aaKnown RBP30.53■■■□□ 2.48
SSBP4-202ENST00000348495 KCNA2P16389 499 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 LRCH2Q5VUJ6 765 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 OLFML2BQ68BL8 750 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 B3GNT9Q6UX72 402 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 SEPT14Q6ZU15 432 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 FSIP1Q8NA03 581 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 CD99L2Q8TCZ2 262 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 EPSTI1Q96J88 318 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 FLRT1Q9NZU1 646 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 HPSEQ9Y251 543 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 EEPD1Q7L9B9 569 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 OTOP1Q7RTM1 612 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 SYMPKQ92797 1274 aaKnown RBP30.53■■■□□ 2.48
SSBP4-202ENST00000348495 BEGAINQ9BUH8 593 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 RAB34Q9BZG1 259 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 GABRQQ9UN88 632 aa30.53■■■□□ 2.48
SSBP4-202ENST00000348495 CEP350Q5VT06 3117 aa30.52■■■□□ 2.48
SSBP4-202ENST00000348495 POTEMA6NI47 508 aa30.52■■■□□ 2.48
SSBP4-202ENST00000348495 FKTNO75072 461 aa30.52■■■□□ 2.48
SSBP4-202ENST00000348495 FBXO16Q8IX29 292 aaPredicted RBP30.52■■■□□ 2.48
SSBP4-202ENST00000348495 ZNF296Q8WUU4 475 aaPredicted RBP30.52■■■□□ 2.48
SSBP4-202ENST00000348495 VTA1Q9NP79 307 aa30.52■■■□□ 2.48
SSBP4-202ENST00000348495 TBC1D22BQ9NU19 505 aa30.52■■■□□ 2.48
SSBP4-202ENST00000348495 A0A1B0GVL5 298 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 PP2D1A8MPX8 630 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 GAS7O60861 476 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 MBD3O95983 291 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 TGFB3P10600 412 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 LIG1P18858 919 aa30.51■■■□□ 2.47
SSBP4-202ENST00000348495 PRKCZQ05513 592 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms