RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 KCNV1Q6PIU1 500 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 KCNB2Q92953 911 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 CUL5Q93034 780 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 INPP4AQ96PE3 977 aaPredicted RBP15.32■□□□□ 0.04
CLCC1-202ENST00000348264 BCAS3Q9H6U6 928 aa15.32■□□□□ 0.04
CLCC1-202ENST00000348264 CXXC1Q9P0U4 656 aaPredicted RBP15.32■□□□□ 0.04
CLCC1-202ENST00000348264 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.31■□□□□ 0.04
CLCC1-202ENST00000348264 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.31■□□□□ 0.04
CLCC1-202ENST00000348264 GRXCR1A8MXD5 290 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 DNAJB2P25686 324 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 PSEN2P49810 448 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 FUT2Q10981 343 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 GDF6Q6KF10 455 aaPredicted RBP15.31■□□□□ 0.04
CLCC1-202ENST00000348264 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 SESTD1Q86VW0 696 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 HERVK_113Q902F9 699 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 SEMA6BQ9H3T3 888 aa15.31■□□□□ 0.04
CLCC1-202ENST00000348264 KLF18A0A0U1RQI7 1052 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 HAS3O00219 553 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 ZBTB43O43298 467 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 FGBP02675 491 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 NEFLP07196 543 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 TGFB3P10600 412 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 ICAM3P32942 547 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 HSPA4P34932 840 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 MFSD10Q14728 455 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 PTGISQ16647 500 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 UBE2SQ16763 222 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 RTN1Q16799 776 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 GNPTABQ3T906 1256 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 PCNX4Q63HM2 1172 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 WWC2Q6AWC2 1192 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 OTOP2Q7RTS6 562 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 HEATR3Q7Z4Q2 680 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 CUL9Q8IWT3 2517 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
CLCC1-202ENST00000348264 ALG1Q9BT22 464 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 PSTPIP2Q9H939 334 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 RBM28Q9NW13 759 aaKnown RBP15.3■□□□□ 0.04
CLCC1-202ENST00000348264 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 GTF2IRD1Q9UHL9 959 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 NOD1Q9Y239 953 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 SNX14Q9Y5W7 946 aa15.3■□□□□ 0.04
CLCC1-202ENST00000348264 TMEM265A0A087WTH1 108 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 GOLGA8AA7E2F4 631 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 GOLGA8BA8MQT2 603 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 STAM2O75886 525 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 HMGB1P09429 215 aaKnown RBP15.29■□□□□ 0.04
CLCC1-202ENST00000348264 PBX2P40425 430 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 DEFB128Q7Z7B8 93 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
CLCC1-202ENST00000348264 CDX2Q99626 313 aaPredicted RBP15.29■□□□□ 0.04
CLCC1-202ENST00000348264 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
CLCC1-202ENST00000348264 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
CLCC1-202ENST00000348264 KAT6AQ92794 2004 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 FIBPO43427 364 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 PPFIA4O75335 1185 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 CDC27P30260 824 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 BFSP2Q13515 415 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
CLCC1-202ENST00000348264 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 MLXIPQ9HAP2 919 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
CLCC1-202ENST00000348264 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 REC8O95072 547 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 LGALS2P05162 132 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 PFKMP08237 780 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 IQCF3P0C7M6 154 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 RCAN1P53805 252 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 APOBRQ0VD83 1088 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 HIC1Q14526 733 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 XRRA1Q6P2D8 792 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 METTL7BQ6UX53 244 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 Q6ZUG5 572 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 CYFIP1Q7L576 1253 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 CAGE1Q8TC20 777 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 MYLIPQ8WY64 445 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
CLCC1-202ENST00000348264 MTIF3Q9H2K0 278 aaKnown RBP15.27■□□□□ 0.04
CLCC1-202ENST00000348264 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
CLCC1-202ENST00000348264 NID2Q14112 1375 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 ZBBXA8MT70 800 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 STXBP3O00186 592 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 NOP56O00567 594 aaKnown RBP15.26■□□□□ 0.03
CLCC1-202ENST00000348264 ITGB5P18084 799 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 RFC2P35250 354 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 NAPAP54920 295 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 FGD1P98174 961 aa15.26■□□□□ 0.03
CLCC1-202ENST00000348264 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
CLCC1-202ENST00000348264 RBL2Q08999 1139 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms