RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 HERVK_113P62684 666 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 SPIRE1Q08AE8 756 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 MOGSQ13724 837 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 CT47A1Q5JQC4 288 aaPredicted RBP20.95■□□□□ 0.94
PTN-201ENST00000348225 LRCH2Q5VUJ6 765 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 SV2BQ7L1I2 683 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 LARP4BQ92615 738 aaKnown RBP20.95■□□□□ 0.94
PTN-201ENST00000348225 UIMC1Q96RL1 719 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 LRRC27Q9C0I9 530 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 VAV3Q9UKW4 847 aa20.95■□□□□ 0.94
PTN-201ENST00000348225 IKBKBO14920 756 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 RPN1P04843 607 aaKnown RBP20.94■□□□□ 0.94
PTN-201ENST00000348225 EIF2AK2P19525 551 aaKnown RBP20.94■□□□□ 0.94
PTN-201ENST00000348225 BMP6P22004 513 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 GJA5P36382 358 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 PLCB2Q00722 1185 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 FMR1Q06787 632 aaKnown RBP eCLIP20.94■□□□□ 0.94
PTN-201ENST00000348225 PGM5Q15124 567 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 RIOX2Q8IUF8 465 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 RAD54LQ92698 747 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 CCDC47Q96A33 483 aaKnown RBP20.94■□□□□ 0.94
PTN-201ENST00000348225 PDLIM2Q96JY6 352 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 NUDT12Q9BQG2 462 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 ZNF577Q9BSK1 485 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 WDR11Q9BZH6 1224 aa20.94■□□□□ 0.94
PTN-201ENST00000348225 CELF2O95319 508 aaKnown RBP20.93■□□□□ 0.94
PTN-201ENST00000348225 IL31RAQ8NI17 732 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 LRRC15Q8TF66 581 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 C7orf25Q9BPX7 421 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 PDCD2LQ9BRP1 358 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 NMRK2Q9NPI5 230 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 A1CFQ9NQ94 594 aaKnown RBP20.93■□□□□ 0.94
PTN-201ENST00000348225 BLOC1S4Q9NUP1 217 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 CYP39A1Q9NYL5 469 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 BTBD7Q9P203 1132 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 PNMA3Q9UL41 463 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 UBIAD1Q9Y5Z9 338 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 GAS7O60861 476 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 CCND2P30279 289 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 COPB2P35606 906 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 PPP2R5CQ13362 524 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 KCNB1Q14721 858 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 NSUN6Q8TEA1 469 aaKnown RBP20.93■□□□□ 0.94
PTN-201ENST00000348225 RIT2Q99578 217 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 TEKT3Q9BXF9 490 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 SPATC1LQ9H0A9 340 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 JADE2Q9NQC1 790 aa20.93■□□□□ 0.94
PTN-201ENST00000348225 PFASO15067 1338 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 PSMD10O75832 226 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 ADCY5O95622 1261 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 ITGB5P18084 799 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 MYL5Q02045 173 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 GPAT2Q6NUI2 795 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 KCTD17Q8N5Z5 321 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
PTN-201ENST00000348225 GTPBP4Q9BZE4 634 aaKnown RBP20.92■□□□□ 0.94
PTN-201ENST00000348225 TRIM9Q9C026 710 aa20.92■□□□□ 0.94
PTN-201ENST00000348225 IPO5O00410 1097 aaKnown RBP20.91■□□□□ 0.94
PTN-201ENST00000348225 SLC25A27O95847 323 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 ARP10275 920 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 CETPP11597 493 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 MYCLP12524 364 aaPredicted RBP20.91■□□□□ 0.94
PTN-201ENST00000348225 RPA1P27694 616 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 GTF2A2P52657 109 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 MRPS9P82933 396 aaKnown RBP20.91■□□□□ 0.94
PTN-201ENST00000348225 ZNF658Q5TYW1 1059 aaPredicted RBP20.91■□□□□ 0.94
PTN-201ENST00000348225 OTOP1Q7RTM1 612 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 PAGR1Q9BTK6 254 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 KIAA1024Q9UPX6 916 aa20.91■□□□□ 0.94
PTN-201ENST00000348225 POTEB3A0JP26 581 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 ERCC5P28715 1186 aaPredicted RBP20.9■□□□□ 0.94
PTN-201ENST00000348225 MTMR1Q13613 665 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 MCM6Q14566 821 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 ECM1Q16610 540 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 POTEBQ6S5H4 581 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 ANKRD35Q8N283 1001 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 ZNF526Q8TF50 670 aaPredicted RBP20.9■□□□□ 0.94
PTN-201ENST00000348225 ZFP91Q96JP5 570 aaPredicted RBP20.9■□□□□ 0.94
PTN-201ENST00000348225 POLR3CQ9BUI4 534 aaPredicted RBP20.9■□□□□ 0.94
PTN-201ENST00000348225 KCNH7Q9NS40 1196 aa20.9■□□□□ 0.94
PTN-201ENST00000348225 MED24O75448 989 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 ASIC1P78348 528 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 DHX8Q14562 1220 aaKnown RBP20.89■□□□□ 0.94
PTN-201ENST00000348225 CHADLQ6NUI6 762 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 POTEEQ6S8J3 1075 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 SARM1Q6SZW1 724 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 NCAPG2Q86XI2 1143 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 SLC45A1Q9Y2W3 748 aa20.89■□□□□ 0.94
PTN-201ENST00000348225 TRPM7Q96QT4 1865 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 CNMDO75829 334 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 STAM2O75886 525 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 NR3C2P08235 984 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 NCAPHQ15003 741 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 NLRX1Q86UT6 975 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 VSIG10LQ86VR7 867 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 CATSPER3Q86XQ3 398 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 DNERQ8NFT8 737 aa20.89■□□□□ 0.93
PTN-201ENST00000348225 TRIM44Q96DX7 344 aaPredicted RBP20.89■□□□□ 0.93
PTN-201ENST00000348225 EIF2AK1Q9BQI3 630 aaKnown RBP20.89■□□□□ 0.93
PTN-201ENST00000348225 AGO4Q9HCK5 861 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms