RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 PHACTR2O75167 634 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 NOL4O94818 638 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 TTLL1O95922 423 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 GPS2Q13227 327 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 MTMR8Q96EF0 704 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 TULP2O00295 520 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 BBOX1O75936 387 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 APBA1Q02410 837 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 SPA17Q15506 151 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZSCAN26Q16670 478 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 SHROOM1Q2M3G4 852 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 DRC1Q96MC2 740 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 EHD2Q9NZN4 543 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 USP21Q9UK80 565 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 JRKLQ9Y4A0 524 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 TLR2O60603 784 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 NFRKBQ6P4R8 1299 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 CCNI2Q6ZMN8 369 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 IPO4Q8TEX9 1081 aaKnown RBP16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 HINFPQ9BQA5 517 aa16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZNF646O15015 1829 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-202ENST00000347545 NCK2O43639 380 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 ADRA2BP18089 450 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 GFPT1Q06210 699 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 PSMD2Q13200 908 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 HYIQ5T013 277 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 PJA2O43164 708 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 MYOCDQ8IZQ8 938 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 TRIM58Q8NG06 486 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 RIN2Q8WYP3 895 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 RAB34Q9BZG1 259 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 E9PMD0 336 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 SLC1A4P43007 532 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 TNNT3P45378 269 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 CCDC84Q86UT8 332 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 TBC1D7Q9P0N9 293 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 SERPINB13Q9UIV8 391 aa16.1■□□□□ 0.17
ARHGEF1-202ENST00000347545 AGPSO00116 658 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 CUL5Q93034 780 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 OSBPL9Q96SU4 736 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 DNAJC18Q9H819 358 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 PANK4Q9NVE7 773 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 COL11A2P13942 1736 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 RNF40O75150 1001 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 ACTN2P35609 894 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZFPM1Q8IX07 1006 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 PROM2Q8N271 834 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 AENQ8WTP8 325 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 LRRC1Q9BTT6 524 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 SELENOOQ9BVL4 669 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZBTB5O15062 677 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 TACC1O75410 805 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 CXCR5P32302 372 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 SCNN1DP51172 638 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 PSMB7Q99436 277 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 DMGDHQ9UI17 866 aaKnown RBP16.08■□□□□ 0.17
ARHGEF1-202ENST00000347545 USP17L15C9J2P7 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L11C9JVI0 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L18D6R9N7 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L22D6RA61 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 AKR1B10O60218 316 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 FGFR1OPO95684 399 aaKnown RBP16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 PRLRP16471 622 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 NFIAQ12857 509 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 FAM26FQ5R3K3 315 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 FOXR1Q6PIV2 292 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms