RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC25A27O95847 323 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 ZBTB48P10074 688 aaPredicted RBP12.36□□□□□ -0.43
ECM1-201ENST00000346569 PLCG1P19174 1290 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 AFMP43652 599 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 ZNF165P49910 485 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 ECM1Q16610 540 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 C11orf57Q6ZUT1 292 aaPredicted RBP12.36□□□□□ -0.43
ECM1-201ENST00000346569 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
ECM1-201ENST00000346569 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 MOV10L1Q9BXT6 1211 aaKnown RBP12.36□□□□□ -0.43
ECM1-201ENST00000346569 DNAJC25Q9H1X3 360 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 BLOC1S4Q9NUP1 217 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 MAN1B1Q9UKM7 699 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
ECM1-201ENST00000346569 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
ECM1-201ENST00000346569 BIN1O00499 593 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
ECM1-201ENST00000346569 NR3C2P08235 984 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 CASP1P29466 404 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 STAT6P42226 847 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 MORC3Q14149 939 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 STAMQ92783 540 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 GSDMAQ96QA5 445 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 PLIN2Q99541 437 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 R3HDMLQ9H3Y0 253 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
ECM1-201ENST00000346569 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 MAFGO15525 162 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 DHX15O43143 795 aaKnown RBP12.34□□□□□ -0.43
ECM1-201ENST00000346569 SMC2O95347 1197 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 MYL1P05976 194 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 SPATA31C1P0DKV0 1188 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 EIF2AK2P19525 551 aaKnown RBP12.34□□□□□ -0.43
ECM1-201ENST00000346569 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
ECM1-201ENST00000346569 PPP2R5CQ13362 524 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 CUL4BQ13620 913 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 CCL15Q16663 113 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 DPCR1Q3MIW9 517 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 ARHGEF16Q5VV41 709 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 DNERQ8NFT8 737 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 NSUN6Q8TEA1 469 aaKnown RBP12.34□□□□□ -0.43
ECM1-201ENST00000346569 SNX29Q8TEQ0 813 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 GTF3C2Q8WUA4 911 aaPredicted RBP12.34□□□□□ -0.43
ECM1-201ENST00000346569 RIT2Q99578 217 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 PTPN18Q99952 460 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 C7orf25Q9BPX7 421 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 WDR11Q9BZH6 1224 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 STK17AQ9UEE5 414 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
ECM1-201ENST00000346569 A0A0G2JMZ2 1700 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 PDHXO00330 501 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
ECM1-201ENST00000346569 EML1O00423 815 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 KLRC4O43908 158 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 MED24O75448 989 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 ERCC3P19447 782 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 RPA1P27694 616 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 COPB2P35606 906 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
ECM1-201ENST00000346569 HUNKP57058 714 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 KCNK18Q7Z418 384 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 CATSPER3Q86XQ3 398 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 KCTD17Q8N5Z5 321 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 INPP4AQ96PE3 977 aaPredicted RBP12.33□□□□□ -0.44
ECM1-201ENST00000346569 IWS1Q96ST2 819 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 ZNF577Q9BSK1 485 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 POLR3CQ9BUI4 534 aaPredicted RBP12.33□□□□□ -0.44
ECM1-201ENST00000346569 NT5C3AQ9H0P0 336 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
ECM1-201ENST00000346569 ASTN1O14525 1302 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 PFASO15067 1338 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 RGS20O76081 388 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 CYP2C8P10632 490 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 MYCLP12524 364 aaPredicted RBP12.32□□□□□ -0.44
ECM1-201ENST00000346569 CCND2P30279 289 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 ERVK-24P63145 666 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
ECM1-201ENST00000346569 CT47A1Q5JQC4 288 aaPredicted RBP12.32□□□□□ -0.44
ECM1-201ENST00000346569 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
ECM1-201ENST00000346569 CNNM4Q6P4Q7 775 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms