RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CDKL2Q92772 493 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 XAB2Q9HCS7 855 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 FGFR1OP2Q9NVK5 253 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 GFPT2O94808 682 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 BIRC2Q13490 618 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 FAM167BQ9BTA0 163 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PUS3Q9BZE2 481 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 INTUQ9ULD6 942 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 GDAQ9Y2T3 454 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 TBX22Q9Y458 520 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 SGK1O00141 431 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 MT-ND3P03897 115 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PCCAP05165 728 aaPredicted RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 KCNA6P17658 529 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 GNPTABQ3T906 1256 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 ZBTB38Q8NAP3 1195 aaPredicted RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 CHMP6Q96FZ7 201 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 LRGUKQ96M69 825 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 TRPA1O75762 1119 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PPP1R37O75864 691 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PHKA1P46020 1223 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 HDLBPQ00341 1268 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 RNF34Q969K3 372 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 TRIM11Q96F44 468 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 DIS3Q9Y2L1 958 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 PDHA1P08559 390 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 MMEL1Q495T6 779 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 FAM186BQ8IYM0 893 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 RUBCNQ92622 972 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 TEX33O43247 280 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 ACSL3O95573 720 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 MYCLP12524 364 aaPredicted RBP18.91■□□□□ 0.62
SPAST-202ENST00000345662 BCAMP50895 628 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 BPIFB4P59827 614 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 PDZD8Q8NEN9 1154 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 GJB4Q9NTQ9 266 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 MAD1L1Q9Y6D9 718 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 RPAP1Q9BWH6 1393 aaPredicted RBP18.91■□□□□ 0.62
SPAST-202ENST00000345662 PDE8BO95263 885 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 CHGBP05060 677 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 ELF1P32519 619 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 PTK2Q05397 1052 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 CXorf38Q8TB03 319 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 DRC3Q9H069 523 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 PUS7LQ9H0K6 701 aaKnown RBP18.91■□□□□ 0.62
SPAST-202ENST00000345662 DISC1Q9NRI5 854 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 EIF3HO15372 352 aaKnown RBP eCLIP18.91■□□□□ 0.62
SPAST-202ENST00000345662 PPP2R5CQ13362 524 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 NME8Q8N427 588 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
SPAST-202ENST00000345662 GCNT4Q9P109 453 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 ZSWIM5Q9P217 1185 aa18.91■□□□□ 0.62
SPAST-202ENST00000345662 SOS2Q07890 1332 aaPredicted RBP18.91■□□□□ 0.62
SPAST-202ENST00000345662 KRT19P08727 400 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 PLCG1P19174 1290 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GARSP41250 739 aaKnown RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 IRX1P78414 480 aaPredicted RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 SYT2Q8N9I0 419 aaPredicted RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GOLGA8QA0A0J9YX86 632 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 ESYT3A0FGR9 886 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GOLGA8OA6NCC3 632 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GOLGA8NF8WBI6 632 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 SPARCL1Q14515 664 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 NFRKBQ6P4R8 1299 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 ALDH8A1Q9H2A2 487 aaPredicted RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 MLXIPQ9HAP2 919 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 FRMPD2Q68DX3 1309 aaPredicted RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 GRID2IPA4D2P6 1211 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GUCY1A3Q02108 690 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 EPN3Q9H201 632 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 TMEM60Q9H2L4 133 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 TAF1DQ9H5J8 278 aaPredicted RBP18.9■□□□□ 0.62
SPAST-202ENST00000345662 BATF3Q9NR55 127 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 CUL4BQ13620 913 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 KCNV2Q8TDN2 545 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 MBD5Q9P267 1494 aa18.9■□□□□ 0.62
SPAST-202ENST00000345662 GYG2O15488 501 aa18.89■□□□□ 0.62
SPAST-202ENST00000345662 SH3BP5O60239 455 aa18.89■□□□□ 0.62
SPAST-202ENST00000345662 ATP1A1P05023 1023 aaKnown RBP18.89■□□□□ 0.62
SPAST-202ENST00000345662 POLR2BP30876 1174 aaKnown RBP18.89■□□□□ 0.62
SPAST-202ENST00000345662 SNX24Q9Y343 169 aa18.89■□□□□ 0.62
SPAST-202ENST00000345662 SCINQ9Y6U3 715 aa18.89■□□□□ 0.62
SPAST-202ENST00000345662 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 PDE1BQ01064 536 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 LRRC43Q8N309 656 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 PIP4K2CQ8TBX8 421 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 NT5C1BQ96P26 610 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 LRRN2O75325 713 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms