RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ARRDC4Q8NCT1 418 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 AIFM3Q96NN9 605 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 PHF20Q9BVI0 1012 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 KCNJ14Q9UNX9 436 aa13.51□□□□□ -0.25
SNCA-202ENST00000345009 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNCA-202ENST00000345009 MAFGO15525 162 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
SNCA-202ENST00000345009 SGPL1O95470 568 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 KRT2P35908 639 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 GJA8P48165 433 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 CLK2P49760 499 aaKnown RBP13.5□□□□□ -0.25
SNCA-202ENST00000345009 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 GNL2Q13823 731 aaKnown RBP13.5□□□□□ -0.25
SNCA-202ENST00000345009 BRDTQ58F21 947 aaPredicted RBP13.5□□□□□ -0.25
SNCA-202ENST00000345009 SEPT14Q6ZU15 432 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 AP5M1Q9H0R1 490 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 Q9Y3F1 56 aa13.5□□□□□ -0.25
SNCA-202ENST00000345009 H3BQV1 296 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 MMP1P03956 469 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
SNCA-202ENST00000345009 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
SNCA-202ENST00000345009 GJB2P29033 226 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 SREBF1P36956 1147 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 USP11P51784 963 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNCA-202ENST00000345009 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 KRT40Q6A162 431 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 TAPT1Q6NXT6 567 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 RNF180Q86T96 592 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
SNCA-202ENST00000345009 FBXO18Q8NFZ0 1043 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 U2AF1L4Q8WU68 220 aaKnown RBP13.49□□□□□ -0.25
SNCA-202ENST00000345009 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
SNCA-202ENST00000345009 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
SNCA-202ENST00000345009 RBM47A0AV96 593 aaKnown RBP13.48□□□□□ -0.25
SNCA-202ENST00000345009 FIBPO43427 364 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 ZEB2O60315 1214 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 CYP3A4P08684 503 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 DUSP28Q4G0W2 176 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 CEP55Q53EZ4 464 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
SNCA-202ENST00000345009 DIS3L2Q8IYB7 885 aaKnown RBP13.48□□□□□ -0.25
SNCA-202ENST00000345009 ANKLE1Q8NAG6 615 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 KATNBL1Q9H079 304 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
SNCA-202ENST00000345009 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
SNCA-202ENST00000345009 MCM3APO60318 1980 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 DTNBO60941 627 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 FOSBP53539 338 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
SNCA-202ENST00000345009 MTMR1Q13613 665 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 NEDD9Q14511 834 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 LCE2DQ5TA82 110 aaPredicted RBP13.47□□□□□ -0.25
SNCA-202ENST00000345009 IL31RAQ8NI17 732 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 GPRASP2Q96D09 838 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
SNCA-202ENST00000345009 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
SNCA-202ENST00000345009 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 OGDHLQ9ULD0 1010 aa13.47□□□□□ -0.25
SNCA-202ENST00000345009 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 KBTBD13C9JR72 458 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 M0R2N6 131 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 DYNC1LI2O43237 492 aaPredicted RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 GH1P01241 217 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 HOXB3P14651 431 aaPredicted RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 SMPD1P17405 629 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 ICAM3P32942 547 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 CPT1AP50416 773 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 GUCY1B3Q02153 619 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 LAMC2Q13753 1193 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 MXRA8Q9BRK3 442 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
SNCA-202ENST00000345009 DDX41Q9UJV9 622 aaKnown RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 DDX49Q9Y6V7 483 aaKnown RBP13.46□□□□□ -0.25
SNCA-202ENST00000345009 BTBD18B2RXH4 712 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 MEIS1O00470 390 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 KPNA6O60684 536 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 C6orf222P0C671 652 aaPredicted RBP13.45□□□□□ -0.26
SNCA-202ENST00000345009 GCFC2P16383 781 aaKnown RBP13.45□□□□□ -0.26
SNCA-202ENST00000345009 CIITAP33076 1130 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 GJA9P57773 515 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 NPY5RQ15761 445 aa13.45□□□□□ -0.26
SNCA-202ENST00000345009 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms