RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 V9GY48 417 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 MYO9BQ13459 2157 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 PALM3A6NDB9 673 aaPredicted RBP15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 TTLL1O95922 423 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 CD4P01730 458 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 RAB30Q15771 203 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 LINC00301Q8NCQ3 95 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 BICD2Q8TD16 824 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 PPM1EQ8WY54 764 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 HERVK_113Q902F9 699 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 PGBD1Q96JS3 809 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 FGD4Q96M96 766 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 ABHD16BQ9H3Z7 469 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 SH3GLB2Q9NR46 395 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 DDX19AQ9NUU7 478 aaKnown RBP15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 KCNJ14Q9UNX9 436 aa15.38■□□□□ 0.05
HERPUD1-202ENST00000344114 SYCE3A1L190 88 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 CTAGE5O15320 804 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 ACRP10323 421 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 KRT2P35908 639 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 CCDC144BQ3MJ40 725 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 ADAMTS19Q8TE59 1207 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 FTOQ9C0B1 505 aaKnown RBP eCLIP15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 KATNBL1Q9H079 304 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 IL23AQ9NPF7 189 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
HERPUD1-202ENST00000344114 A0A1W2PQ27 194 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 A0A1W2PQ64 194 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 A0A1W2PQD8 194 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 F5H6K3 240 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 SPTLC2O15270 562 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 RAD21O60216 631 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 KLRC3Q07444 240 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 STAG2Q8N3U4 1231 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 SLC43A3Q8NBI5 491 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 GRPEL1Q9HAV7 217 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 VPS54Q9P1Q0 977 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 RAPGEFL1Q9UHV5 662 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 MSRAQ9UJ68 235 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 BTBD18B2RXH4 712 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 KLRF2D3W0D1 207 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 PPP6R2O75170 966 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 NDUFB10O96000 172 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 SNHG28P0DPA3 235 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 LIG1P18858 919 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 CALML3P27482 149 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 ME1P48163 572 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 SLC39A14Q15043 492 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 GNASQ5JWF2 1037 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 CCDC73Q6ZRK6 1079 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 ARMCX2Q7L311 632 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 GAS2L3Q86XJ1 694 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 CCDC148Q8NFR7 591 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 UHRF1Q96T88 793 aaPredicted RBP15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 CXXC1Q9P0U4 656 aaPredicted RBP15.36■□□□□ 0.05
HERPUD1-202ENST00000344114 hCG_1642624A0A1W2PR95 340 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 hCG_1984214I3L0E3 225 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 ZBED4O75132 1171 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 PDHBP11177 359 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 CYP2C18P33260 490 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 ADALQ6DHV7 355 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 ZNF713Q8N859 430 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 YBX2Q9Y2T7 364 aaKnown RBP15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 MORC2Q9Y6X9 1032 aaPredicted RBP15.35■□□□□ 0.05
HERPUD1-202ENST00000344114 ASTN1O14525 1302 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 FGBP02675 491 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 OAZ1P54368 228 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 CCDC85BQ15834 202 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 ANKRD35Q8N283 1001 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms