RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RGS7P49802 495 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 NAIF1Q69YI7 327 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 NSUN7Q8NE18 718 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 RELTQ969Z4 430 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SH3KBP1Q96B97 665 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ARHGEF10LQ9HCE6 1279 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 PDS5AQ29RF7 1337 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SNX2O60749 519 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TCF7P36402 384 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF75DP51815 510 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 GJA9P57773 515 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 NR1H3Q13133 447 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CCNJQ5T5M9 372 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C11orf74Q86VG3 221 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CDR2LQ86X02 465 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SPICE1Q8N0Z3 855 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 LSMEM2Q8N112 164 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CNKSR1Q969H4 720 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 GPR101Q96P66 508 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 STAG3Q9UJ98 1225 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ATP8B2P98198 1209 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CEP55Q53EZ4 464 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM69Q86WT6 500 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TNIP3Q96KP6 325 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 KNL1Q8NG31 2342 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 KRT10P13645 584 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 HDGFP51858 240 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 MORC1Q86VD1 984 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 LPIN2Q92539 896 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TUBA1CQ9BQE3 449 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 EFR3BQ9Y2G0 817 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CUX1P39880 1505 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB4P48594 390 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C15orf59Q2T9L4 293 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 HP1BP3Q5SSJ5 553 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 MAP3K14Q99558 947 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CYP4F11Q9HBI6 524 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 V9GYQ6 96 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SEC24BO95487 1268 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 GRM1Q13255 1194 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TINF2Q9BSI4 451 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TOR1AIP2Q8NFQ8 470 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MAFFQ9ULX9 164 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC42Q9Y546 428 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SPAG7O75391 227 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CCT5P48643 541 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 DDI2Q5TDH0 399 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC84Q86UT8 332 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 NECAB1Q8N987 351 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ART5Q96L15 291 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 KRT23Q9C075 422 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CLEC4MQ9H2X3 399 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SEL1LQ9UBV2 794 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 KDM2AQ9Y2K7 1162 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PSMA3P25788 255 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ITIH4Q14624 930 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CFAP70Q5T0N1 1121 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CD302Q8IX05 232 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RMDN3Q96TC7 470 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 LLPHQ9BRT6 129 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ANO9A1A5B4 782 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 MAGEA13PA6NCF6 341 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC142Q17RM4 750 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CDH24Q86UP0 819 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PANK3Q9H999 370 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 C15orf41Q9Y2V0 281 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TCP1P17987 556 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ACAP2Q15057 778 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 KCTD21Q4G0X4 260 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CNNM3Q8NE01 707 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 FLCNQ8NFG4 579 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PHF24Q9UPV7 400 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB6P35237 376 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ST5P78524 1137 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TRAF7Q6Q0C0 670 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TTLL7Q6ZT98 887 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 KRT77Q7Z794 578 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 DGCR14Q96DF8 476 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 FHDC1Q9C0D6 1143 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 SUCLA2Q9P2R7 463 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RPL13P26373 211 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PPARDQ03181 441 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TAB1Q15750 504 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 AATKQ6ZMQ8 1374 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 INPP5DQ92835 1189 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF521Q96K83 1311 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 CRNNQ9UBG3 495 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TBK1Q9UHD2 729 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 TTC4O95801 387 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 RBM43Q6ZSC3 357 aaKnown RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 DPF3Q92784 378 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 APOL4Q9BPW4 351 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 AIFM2Q9BRQ8 373 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 OSBPL1AQ9BXW6 950 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 C9orf84Q5VXU9 1444 aa4.06□□□□□ -1.76
SYNE2-202ENST00000344113 PER1O15534 1290 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF189O75820 626 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms