RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ATP8B4Q8TF62 1192 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 SLC4A7Q9Y6M7 1214 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 NFASCO94856 1347 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 NRCAMQ92823 1304 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 GOLGA6L6A8MZA4 724 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 HIP1O00291 1037 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 CDK8P49336 464 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 POLGP54098 1239 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 MICAL1Q8TDZ2 1067 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 ALDH8A1Q9H2A2 487 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 MTMR4Q9NYA4 1195 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 INSL6Q9Y581 213 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 ZNF536O15090 1300 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 F2P00734 622 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 ADAM17P78536 824 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 CEP85Q6P2H3 762 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 SUSD6Q92537 303 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 LRFN3Q9BTN0 628 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 SENP6Q9GZR1 1112 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 CXorf56Q9H5V9 222 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 JRKLQ9Y4A0 524 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 PLXND1Q9Y4D7 1925 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 MYO1CO00159 1063 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 SRGAP3O43295 1099 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 CCAR1Q8IX12 1150 aaKnown RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 EFHBQ8N7U6 833 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 KIAA1524Q8TCG1 905 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 EDAQ92838 391 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 PIH1D3Q9NQM4 214 aaKnown RBP8.38□□□□□ -1.07
ZNF540-202ENST00000343599 USTQ9Y2C2 406 aa8.38□□□□□ -1.07
ZNF540-202ENST00000343599 MTCL1Q9Y4B5 1905 aaKnown RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 F8W031 263 aaPredicted RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 LPXNO60711 386 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 MICAL2O94851 1124 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 AMHP03971 560 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 IQCF3P0C7M6 154 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 CYP2B6P20813 491 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 CYP7A1P22680 504 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 WEE1P30291 646 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 ADORA1P30542 326 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 KBTBD3Q8NAB2 608 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 DBNLQ9UJU6 430 aaKnown RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 SUFUQ9UMX1 484 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 HOXA2O43364 376 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 PAPSS2O95340 614 aaPredicted RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 RASA1P20936 1047 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 FECHP22830 423 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 ADCYAP1R1P41586 468 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 GYS2P54840 703 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 PDE4BQ07343 736 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 ITGA7Q13683 1181 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 KCNA10Q16322 511 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 C1orf228Q6PIY5 440 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 CCDC91Q7Z6B0 441 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 ZNF397Q8NF99 534 aaPredicted RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 GPT2Q8TD30 523 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 NELL1Q92832 810 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 CDHR1Q96JP9 859 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
ZNF540-202ENST00000343599 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 MYH6P13533 1939 aa8.37□□□□□ -1.07
ZNF540-202ENST00000343599 TTC36A6NLP5 189 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 SMTNL1A8MU46 457 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 USP5P45974 858 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 SETQ01105 290 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-202ENST00000343599 KCNC3Q14003 757 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 SND1Q7KZF4 910 aaKnown RBP eCLIP8.36□□□□□ -1.07
ZNF540-202ENST00000343599 TXLNBQ8N3L3 684 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 STRBPQ96SI9 672 aaKnown RBP8.36□□□□□ -1.07
ZNF540-202ENST00000343599 NACAP1Q9BZK3 213 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 ARID2Q68CP9 1835 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 F6X3S4 739 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 TNFAIP2Q03169 654 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 TAP1Q03518 808 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 PPP2R5BQ15173 497 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 SYT10Q6XYQ8 523 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 C17orf53Q8N3J3 647 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-202ENST00000343599 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
ZNF540-202ENST00000343599 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-202ENST00000343599 CYP39A1Q9NYL5 469 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms