RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 STARD7Q9NQZ5 370 aa14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PCDHA4Q9UN74 947 aa14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 HOXD8P13378 290 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MCM2P49736 904 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NLRP5P59047 1200 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 BEX3Q00994 111 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CELF3Q5SZQ8 465 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PRPF38BQ5VTL8 546 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MYSM1Q5VVJ2 828 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NIPA1Q7RTP0 329 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ANKRD33Q7Z3H0 272 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NECAB1Q8N987 351 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 SLC43A3Q8NBI5 491 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MROH7Q68CQ1 1323 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 A0A0U1RQG5 324 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PPFIA3O75145 1194 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 FDPSP14324 419 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ITGB5P18084 799 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CDK7P50613 346 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PURAQ00577 322 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 SEMA3FQ13275 785 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CEP55Q53EZ4 464 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 DHX37Q8IY37 1157 aaKnown RBP14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 COPS5Q92905 334 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 FERMT2Q96AC1 680 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PHF20Q9BVI0 1012 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PDE4DIPQ5VU43 2346 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 M0R2N6 131 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PPFIA4O75335 1185 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PTGS1P23219 599 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 RTP1P59025 263 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ARHGAP4P98171 946 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 SP2Q02086 613 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ST3GAL1Q11201 340 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MTMR1Q13613 665 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NPY5RQ15761 445 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CXCL17Q6UXB2 119 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MXRA8Q9BRK3 442 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 TMEM260Q9NX78 707 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ARVCFO00192 962 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MEIS1O00470 390 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 GGPS1O95749 300 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MMP3P08254 477 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CIITAP33076 1130 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 USP11P51784 963 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 HMGN5P82970 282 aaKnown RBP14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 DGKDQ16760 1214 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 JAKMIP3Q5VZ66 844 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 AFG1LQ8WV93 481 aa14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MTG1Q9BT17 334 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQA1-201ENST00000343139 KCNA2P16389 499 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PGBD1Q96JS3 809 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 AIFM3Q96NN9 605 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
HLA-DQA1-201ENST00000343139 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PTPN11Q06124 597 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ITGA7Q13683 1181 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 HSDL1Q3SXM5 330 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 TRIM60Q495X7 471 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NFRKBQ6P4R8 1299 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 C7orf61Q8IZ16 206 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ATP11BQ9Y2G3 1177 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NFASCO94856 1347 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 KIAA1217Q5T5P2 1943 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 IGLV3-22A0A075B6J6 115 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 DCDC2CA8MYV0 355 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 H0YGN5 161 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 ADAMTS3O15072 1205 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MYL3P08590 195 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 MOXD1Q6UVY6 613 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 KRT25Q7Z3Z0 450 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 KATNAL1Q9BW62 490 aa14.9□□□□□ -0.02
HLA-DQA1-201ENST00000343139 GRIN2DO15399 1336 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 FAM86B1E9PN63 330 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 JAK2O60674 1132 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 F2P00734 622 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 FAM86B2P0C5J1 330 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 ZNF76P36508 570 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 TLE2Q04725 743 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 CYFIP1Q7L576 1253 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 SESTD1Q86VW0 696 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 FAM126BQ8IXS8 530 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 CYP2W1Q8TAV3 490 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 RASGRP4Q8TDF6 673 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
HLA-DQA1-201ENST00000343139 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms