RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 KCNMA1Q12791 1236 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 COASYQ13057 564 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SEMA3FQ13275 785 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 PDIA5Q14554 519 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 VPS72Q15906 364 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 FIGNQ5HY92 759 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 OSBPL9Q96SU4 736 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 RABEP2Q9H5N1 569 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 COL22A1Q8NFW1 1626 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 ESYT2A0FGR8 921 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 FAM170AA1A519 330 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 RGL2O15211 777 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 MCM3P25205 808 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 CACNB3P54284 484 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 CDK17Q00537 523 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 LRRC63Q05C16 580 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 HERC4Q5GLZ8 1057 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.663e-6■□□□□ 8.1
UBE2D3-203ENST00000343106 DNAAF5Q86Y56 855 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 BAP1Q92560 729 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 CUL5Q93034 780 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 MTMR8Q96EF0 704 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 LSM14BQ9BX40 385 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 RIC8AQ9NPQ8 531 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 KIAA1551Q9HCM1 1747 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 TARSL2A2RTX5 802 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 POTECB2RU33 542 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 MEIS1O00470 390 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 KRT18P05783 430 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 SMARCA1P28370 1054 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 TCP10Q12799 353 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 PTPROQ16827 1216 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 FAM26FQ5R3K3 315 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 CCDC70Q6NSX1 233 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 PDXDC1Q6P996 788 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 DNAJC19Q96DA6 116 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 ALS2CR12Q96Q35 445 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 MED4Q9NPJ6 270 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 CWC15Q9P013 229 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 FTCDO95954 541 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 TAL1P17542 331 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 MRPL12P52815 198 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 FKBP3Q00688 224 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 MUM1L1Q5H9M0 696 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 FAM83BQ5T0W9 1011 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 IQCEQ6IPM2 695 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 AFAP1L1Q8TED9 768 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 USP21Q9UK80 565 aa10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-203ENST00000343106 RREB1Q92766 1687 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 MYH8P13535 1937 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 GOLGA6BA6NDN3 693 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 AGPSO00116 658 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 PLA2G4BP0C869 781 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 GYS1P13807 737 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 EPS15P42566 896 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 NFIAQ12857 509 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 RAPGEF1Q13905 1077 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 TMEM119Q4V9L6 283 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 COBLL1Q53SF7 1204 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 DNAJC21Q5F1R6 531 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 TTC19Q6DKK2 380 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 LRRC31Q6UY01 552 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 C15orf52Q6ZUT6 534 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 GPBP1Q86WP2 473 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 TBC1D22AQ8WUA7 517 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 TBC1D5Q92609 795 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 ADAMTS1Q9UHI8 967 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 LAMB2P55268 1798 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 GAKO14976 1311 aa10.93□□□□□ -0.66
UBE2D3-203ENST00000343106 TLR2O60603 784 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 BBOX1O75936 387 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 NOL4O94818 638 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 PAFAH1B1P43034 410 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 GABPAQ06546 454 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 ADAM9Q13443 819 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 SFMBT2Q5VUG0 894 aa10.92□□□□□ -0.66
UBE2D3-203ENST00000343106 HGSNATQ68CP4 663 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms