RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CABP7Q86V35 215 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 RASSF8Q8NHQ8 419 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 TBC1D22AQ8WUA7 517 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 CCT6BQ92526 530 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 PPANQ9NQ55 473 aaKnown RBP10.65□□□□□ -0.7
HOXA1-201ENST00000343060 HAUS2Q9NVX0 235 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 LRP2BPQ9P2M1 347 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 BAZ2BQ9UIF8 2168 aaKnown RBP10.65□□□□□ -0.7
HOXA1-201ENST00000343060 ZNF804BA4D1E1 1349 aa10.65□□□□□ -0.71
HOXA1-201ENST00000343060 RTN2O75298 545 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 FGFR1OPO95684 399 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 EZRP15311 586 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 PPP2R2AP63151 447 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 TRADDQ15628 312 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 DNAJC10Q8IXB1 793 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 SCFD2Q8WU76 684 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 EEF2KMTQ96G04 330 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 TRMT112Q9UI30 125 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 LAMB2P55268 1798 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 SERPING1P05155 500 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 HPDP32754 393 aaPredicted RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 BCAMP50895 628 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 LRRC63Q05C16 580 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 MMRN2Q9H8L6 949 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 CEP72Q9P209 647 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 PCDHA6Q9UN73 950 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
HOXA1-201ENST00000343060 PCDHA8Q9Y5H6 950 aa10.64□□□□□ -0.71
HOXA1-201ENST00000343060 CYP2D7A0A087X1C5 515 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 CCDC194A0A1B0GVG4 234 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 SNAP23O00161 211 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 TLR2O60603 784 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
HOXA1-201ENST00000343060 ZBTB48P10074 688 aaPredicted RBP10.63□□□□□ -0.71
HOXA1-201ENST00000343060 DRD4P21917 467 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 KIF5BP33176 963 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 SLC8A3P57103 927 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 AMPD3Q01432 767 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 SLC9C1Q4G0N8 1177 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 RASGRP4Q8TDF6 673 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 RAPGEF5Q92565 580 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 CNOT8Q9UFF9 292 aaKnown RBP10.63□□□□□ -0.71
HOXA1-201ENST00000343060 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 PVALEFA0A1B0GWK0 134 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 FTCDO95954 541 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 GSTA1P08263 222 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 KLRC1P26715 233 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 SPDYCQ5MJ68 293 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 STAG2Q8N3U4 1231 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 ACTRT1Q8TDG2 376 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 SEC14L1Q92503 715 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 CENPTQ96BT3 561 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 PLIN2Q99541 437 aa10.63□□□□□ -0.71
HOXA1-201ENST00000343060 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 STARD3NLO95772 234 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 ATP2B2Q01814 1243 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 SLC18A3Q16572 532 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 RCSD1Q6JBY9 416 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 TLCD1Q96CP7 247 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 PBKQ96KB5 322 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 MMTAG2Q9BU76 263 aaKnown RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 CNOT10Q9H9A5 744 aaKnown RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 TCP11L1Q9NUJ3 509 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 ERVV-1B6SEH8 477 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 NOL4O94818 638 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 CTNNA1P35221 906 aaKnown RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 USP11P51784 963 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 ELF3P78545 371 aaPredicted RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 RIPK1Q13546 671 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 INF2Q27J81 1249 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 GKAP1Q5VSY0 366 aaPredicted RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 CRELD2Q6UXH1 353 aaPredicted RBP10.62□□□□□ -0.71
HOXA1-201ENST00000343060 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 EBF2Q9HAK2 575 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
HOXA1-201ENST00000343060 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 NMT2O60551 498 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 NT5C2P49902 561 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 EHHADHQ08426 723 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms