RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SKILP12757 684 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 HMGCS2P54868 508 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 GHRHRQ02643 423 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 MUM1L1Q5H9M0 696 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.34■■□□□ 1.17
RTN1-202ENST00000342503 CATSPER3Q86XQ3 398 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 KIAA0895Q8NCT3 520 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 CTAGE1Q96RT6 745 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 COL20A1Q9P218 1284 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 LIMA1Q9UHB6 759 aaKnown RBP22.34■■□□□ 1.17
RTN1-202ENST00000342503 STK24Q9Y6E0 443 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 C19orf81C9J6K1 198 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 USP2O75604 605 aaPredicted RBP22.34■■□□□ 1.17
RTN1-202ENST00000342503 PLA2G4BP0C869 781 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 SFPQP23246 707 aaKnown RBP eCLIP22.34■■□□□ 1.17
RTN1-202ENST00000342503 COBLL1Q53SF7 1204 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 C9orf131Q5VYM1 1079 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 DLK2Q6UY11 383 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.34■■□□□ 1.17
RTN1-202ENST00000342503 ATG4CQ96DT6 458 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 ZFP91Q96JP5 570 aaPredicted RBP22.34■■□□□ 1.17
RTN1-202ENST00000342503 SLC39A2Q9NP94 309 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 HOMER2Q9NSB8 354 aa22.34■■□□□ 1.17
RTN1-202ENST00000342503 ADD3Q9UEY8 706 aaKnown RBP22.34■■□□□ 1.17
RTN1-202ENST00000342503 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 KCNJ18B7U540 433 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 VWA5AO00534 786 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 TEX33O43247 280 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 SSBP05455 408 aaKnown RBP eCLIP22.33■■□□□ 1.17
RTN1-202ENST00000342503 POTEIP0CG38 1075 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 SPATA31C1P0DKV0 1188 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 FDX1P10109 184 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 IDEP14735 1019 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 RPA1P27694 616 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 PPP1R2P41236 205 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 SPAG1Q07617 926 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 TBX2Q13207 712 aaPredicted RBP22.33■■□□□ 1.17
RTN1-202ENST00000342503 KCNJ12Q14500 433 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 CEP55Q53EZ4 464 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 POTEGQ6S5H5 508 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 POTEEQ6S8J3 1075 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 SLC5A5Q92911 643 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 DNAJC19Q96DA6 116 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 WNK4Q96J92 1243 aa22.33■■□□□ 1.17
RTN1-202ENST00000342503 RPTORQ8N122 1335 aa22.33■■□□□ 1.16
RTN1-202ENST00000342503 CCNE1P24864 410 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 KRT31Q15323 416 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 FILIP1LQ4L180 1135 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 TCP11X2Q5H9J9 407 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 TTI2Q6NXR4 508 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 P2RX5Q93086 422 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 RABGAP1Q9Y3P9 1069 aa22.32■■□□□ 1.16
RTN1-202ENST00000342503 PAPPA2Q9BXP8 1791 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 EML1O00423 815 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 MEIS1O00470 390 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 LRCH2Q5VUJ6 765 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 SPECC1LQ69YQ0 1117 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 SLC30A10Q6XR72 485 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 DCPSQ96C86 337 aaKnown RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 TRIM47Q96LD4 638 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 DUSP9Q99956 384 aaKnown RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 PNMA2Q9UL42 364 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 AFG3L2Q9Y4W6 797 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 OTOFQ9HC10 1997 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 ADM5C9JUS6 153 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 PSMD10O75832 226 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 ARP10275 920 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 EHHADHQ08426 723 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 PSMD2Q13200 908 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 ANKRD40Q6AI12 368 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 OTOP1Q7RTM1 612 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 GPBP1Q86WP2 473 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 IRF2BP1Q8IU81 584 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 SYTL5Q8TDW5 730 aaPredicted RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 EIF2AK1Q9BQI3 630 aaKnown RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 MXRA8Q9BRK3 442 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 POLR3CQ9BUI4 534 aaPredicted RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 SRRTQ9BXP5 876 aaKnown RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 THAP9Q9H5L6 903 aa22.31■■□□□ 1.16
RTN1-202ENST00000342503 BMP2KQ9NSY1 1161 aaPredicted RBP22.31■■□□□ 1.16
RTN1-202ENST00000342503 BICDL2A1A5D9 508 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 LRRC10BA6NIK2 292 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 DSG3P32926 999 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 COPB1P53618 953 aaKnown RBP22.3■■□□□ 1.16
RTN1-202ENST00000342503 SLC12A3P55017 1021 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 PSMC6P62333 389 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 SETQ01105 290 aaPredicted RBP22.3■■□□□ 1.16
RTN1-202ENST00000342503 GOLGA8FQ08AF8 430 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 GOLGA8DPQ0D2H9 430 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 SAMD3Q8N6K7 520 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 ANKRD20A12PQ8NF67 263 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 TRERF1Q96PN7 1200 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 PANK4Q9NVE7 773 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 TAB2Q9NYJ8 693 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 MAP3K20Q9NYL2 800 aaKnown RBP22.3■■□□□ 1.16
RTN1-202ENST00000342503 TMOD4Q9NZQ9 345 aa22.3■■□□□ 1.16
RTN1-202ENST00000342503 NPHP3-ACAD11A0A0J9YXS1 232 aa22.29■■□□□ 1.16
RTN1-202ENST00000342503 CYP11B2P19099 503 aa22.29■■□□□ 1.16
RTN1-202ENST00000342503 COASYQ13057 564 aa22.29■■□□□ 1.16
RTN1-202ENST00000342503 PPP2R5CQ13362 524 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms