RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RTN1Q16799 776 aa23.2■■□□□ 1.3
SYNE2-201ENST00000341472 C7orf31Q8N865 590 aa23.2■■□□□ 1.3
SYNE2-201ENST00000341472 GPKOWQ92917 476 aaPredicted RBP eCLIP23.2■■□□□ 1.3
SYNE2-201ENST00000341472 KATNAL1Q9BW62 490 aa23.2■■□□□ 1.3
SYNE2-201ENST00000341472 FRMPD4Q14CM0 1322 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 UBA1P22314 1058 aaKnown RBP23.19■■□□□ 1.3
SYNE2-201ENST00000341472 HSDL1Q3SXM5 330 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 OTOP2Q7RTS6 562 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 HEATR3Q7Z4Q2 680 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 GUCD1Q96NT3 240 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 INPP4AQ96PE3 977 aaPredicted RBP23.19■■□□□ 1.3
SYNE2-201ENST00000341472 ALG1Q9BT22 464 aa23.19■■□□□ 1.3
SYNE2-201ENST00000341472 KLF18A0A0U1RQI7 1052 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 REC8O95072 547 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 HOXD8P13378 290 aaPredicted RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 HSPA4P34932 840 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 NEDD9Q14511 834 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 MFSD10Q14728 455 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 KIAA0753Q2KHM9 967 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 PCNX4Q63HM2 1172 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 GDF6Q6KF10 455 aaPredicted RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 TTYH1Q9H313 450 aaPredicted RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 HDAC6Q9UBN7 1215 aa23.18■■□□□ 1.3
SYNE2-201ENST00000341472 NAP1L2Q9ULW6 460 aaPredicted RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 V9GY48 417 aaPredicted RBP23.18■■□□□ 1.3
SYNE2-201ENST00000341472 TMEM265A0A087WTH1 108 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 GRXCR1A8MXD5 290 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 PITPNM1O00562 1244 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 FIBPO43427 364 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 F2P00734 622 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 IQCF3P0C7M6 154 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 RFC2P35250 354 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 NLRX1Q86UT6 975 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 CDX2Q99626 313 aaPredicted RBP23.17■■□□□ 1.3
SYNE2-201ENST00000341472 BCAS3Q9H6U6 928 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 CXXC1Q9P0U4 656 aaPredicted RBP23.17■■□□□ 1.3
SYNE2-201ENST00000341472 SNX14Q9Y5W7 946 aa23.17■■□□□ 1.3
SYNE2-201ENST00000341472 LAMA2P24043 3122 aaKnown RBP23.16■■□□□ 1.3
SYNE2-201ENST00000341472 GOLGA8AA7E2F4 631 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 GOLGA8BA8MQT2 603 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 HAS3O00219 553 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 PFKMP08237 780 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 ZNF286BP0CG31 522 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 DNAJB2P25686 324 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 DEFB128Q7Z7B8 93 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 CCDC155Q8N6L0 562 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 SLC17A8Q8NDX2 589 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 TIFAQ96CG3 184 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 VWCEQ96DN2 955 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 GTF2IRD1Q9UHL9 959 aa23.16■■□□□ 1.3
SYNE2-201ENST00000341472 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 NOP56O00567 594 aaKnown RBP23.15■■□□□ 1.3
SYNE2-201ENST00000341472 CPA1P15085 419 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 FUT2Q10981 343 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 SEMA3FQ13275 785 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 UBE2SQ16763 222 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 METTL7BQ6UX53 244 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 Q6ZUG5 572 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 CYFIP1Q7L576 1253 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 CAGE1Q8TC20 777 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 SLC4A7Q9Y6M7 1214 aa23.15■■□□□ 1.3
SYNE2-201ENST00000341472 RCAN1P53805 252 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 SENP7Q9BQF6 1050 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 C16orf70Q9BSU1 422 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 FTOQ9C0B1 505 aaKnown RBP eCLIP23.14■■□□□ 1.29
SYNE2-201ENST00000341472 FAM217BQ9NTX9 383 aaPredicted RBP23.14■■□□□ 1.29
SYNE2-201ENST00000341472 MSRAQ9UJ68 235 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 PCDHA6Q9UN73 950 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 PCDHA8Q9Y5H6 950 aa23.14■■□□□ 1.29
SYNE2-201ENST00000341472 CCDC196A0A1B0GTZ2 297 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 ZBBXA8MT70 800 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 ACTN1P12814 892 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 PSMA5P28066 241 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 PBX2P40425 430 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 NAPAP54920 295 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 ERICH6BQ5W0A0 696 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 WWC2Q6AWC2 1192 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 GIMAP8Q8ND71 665 aaPredicted RBP23.13■■□□□ 1.29
SYNE2-201ENST00000341472 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 CDHR1Q96JP9 859 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 CTAGE1Q96RT6 745 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 USP26Q9BXU7 913 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 PBX4Q9BYU1 374 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 ZNF576Q9H609 170 aa23.13■■□□□ 1.29
SYNE2-201ENST00000341472 CNTNAP5Q8WYK1 1306 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 H3BRB1 525 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 CDC27P30260 824 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 ADD1P35611 737 aaKnown RBP23.12■■□□□ 1.29
SYNE2-201ENST00000341472 APOBRQ0VD83 1088 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 RAB30Q15771 203 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 TEX2Q8IWB9 1127 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 BRF1Q92994 677 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 GPRASP2Q96D09 838 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 TUT1Q9H6E5 874 aaKnown RBP23.12■■□□□ 1.29
SYNE2-201ENST00000341472 EHMT1Q9H9B1 1298 aa23.12■■□□□ 1.29
SYNE2-201ENST00000341472 SCN10AQ9Y5Y9 1956 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 LGALS2P05162 132 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 SELPP16109 830 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms