RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MTMR1Q13613 665 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 LETM2Q2VYF4 491 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 GNPTABQ3T906 1256 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 IFFO2Q5TF58 517 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 IQSEC1Q6DN90 963 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 CYFIP1Q7L576 1253 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 DDX41Q9UJV9 622 aaKnown RBP15.05■□□□□ -0
TUBD1-202ENST00000340993 OGDHLQ9ULD0 1010 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 KIF28PB7ZC32 967 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 KBTBD13C9JR72 458 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 ATP9AO75110 1047 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 MYL3P08590 195 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 CUL4AQ13619 759 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 NONOQ15233 471 aaKnown RBP eCLIP15.04■□□□□ -0
TUBD1-202ENST00000340993 SAFBQ15424 915 aaKnown RBP eCLIP15.04■□□□□ -0
TUBD1-202ENST00000340993 KCNA10Q16322 511 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
TUBD1-202ENST00000340993 DAGLBQ8NCG7 672 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 AFG1LQ8WV93 481 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
TUBD1-202ENST00000340993 VTI1AQ96AJ9 217 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 SENP6Q9GZR1 1112 aaPredicted RBP15.04■□□□□ -0
TUBD1-202ENST00000340993 SPC25Q9HBM1 224 aa15.04■□□□□ -0
TUBD1-202ENST00000340993 LOC102724159A0A0B4J2E5 919 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 VPS37CA5D8V6 355 aaPredicted RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 ADAMTS4O75173 837 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 PWP2Q15269 919 aaKnown RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 FSCN1Q16658 493 aaKnown RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 CCDC62Q6P9F0 684 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 RNF180Q86T96 592 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 NLRX1Q86UT6 975 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 PLA2G4DQ86XP0 818 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 DHX37Q8IY37 1157 aaKnown RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 SNX21Q969T3 373 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 MXRA8Q9BRK3 442 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 MAF1Q9H063 256 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 MLXIPQ9HAP2 919 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 UBIAD1Q9Y5Z9 338 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 RBM47A0AV96 593 aaKnown RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 WNT7AO00755 349 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 NBR1Q14596 966 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 CEP55Q53EZ4 464 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
TUBD1-202ENST00000340993 CXCL17Q6UXB2 119 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 KRT25Q7Z3Z0 450 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 FBXO18Q8NFZ0 1043 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 SPATA33Q96N06 139 aa15.03■□□□□ -0
TUBD1-202ENST00000340993 CEP290O15078 2479 aa15.02■□□□□ -0
TUBD1-202ENST00000340993 FIBPO43427 364 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 EDIL3O43854 480 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 CCNT1O60563 726 aaKnown RBP15.02□□□□□ -0.01
TUBD1-202ENST00000340993 GH1P01241 217 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 ZNF286BP0CG31 522 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 PSMC6P62333 389 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 ARHGAP1Q07960 439 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 GALNT17Q6IS24 598 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 FERMT3Q86UX7 667 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 ARRDC4Q8NCT1 418 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 ALPK3Q96L96 1907 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 JADE2Q9NQC1 790 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 KCNH7Q9NS40 1196 aa15.02□□□□□ -0.01
TUBD1-202ENST00000340993 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 RBAK-RBAKDNI3L0D1 243 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 CTAGE5O15320 804 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 SLC37A4O43826 429 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 ASGR1P07306 291 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 GJA9P57773 515 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 HSDL1Q3SXM5 330 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 C11orf49Q9H6J7 331 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 KIF3AQ9Y496 699 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 PDE4DIPQ5VU43 2346 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 DNM1LO00429 736 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 NOP56O00567 594 aaKnown RBP15.01□□□□□ -0.01
TUBD1-202ENST00000340993 CHMP2AO43633 222 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 KCNA2P16389 499 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
TUBD1-202ENST00000340993 CELF3Q5SZQ8 465 aaKnown RBP15.01□□□□□ -0.01
TUBD1-202ENST00000340993 UTP14CQ5TAP6 766 aaKnown RBP15.01□□□□□ -0.01
TUBD1-202ENST00000340993 XRRA1Q6P2D8 792 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 GPRASP2Q96D09 838 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 ZNF577Q9BSK1 485 aa15.01□□□□□ -0.01
TUBD1-202ENST00000340993 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
TUBD1-202ENST00000340993 A0A1W2PQY0 241 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 STAM2O75886 525 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 MMP3P08254 477 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 ACLYP53396 1101 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 TRMT1LQ7Z2T5 733 aaKnown RBP15□□□□□ -0.01
TUBD1-202ENST00000340993 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 NEK8Q86SG6 692 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 TRIM50Q86XT4 487 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 KLHDC9Q8NEP7 349 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 CRYGNQ8WXF5 182 aa15□□□□□ -0.01
TUBD1-202ENST00000340993 UPF3AQ9H1J1 476 aaKnown RBP15□□□□□ -0.01
TUBD1-202ENST00000340993 AGO4Q9HCK5 861 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms