RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 PNKPQ96T60 521 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CNOT10Q9H9A5 744 aaKnown RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 GCNT4Q9P109 453 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 GTF2IP78347 998 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 ALX1Q15699 326 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 DNAI2Q9GZS0 605 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CAPN11Q9UMQ6 739 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 PACSIN2Q9UNF0 486 aaPredicted RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 MEIS1O00470 390 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 MECOMQ03112 1051 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CFAP157Q5JU67 520 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 ATF2P15336 505 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 ATP2C1P98194 919 aaPredicted RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 PPP1R21Q6ZMI0 780 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
RRP1B-201ENST00000340648 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
RRP1B-201ENST00000340648 TROVE2P10155 538 aaKnown RBP eCLIP16.16■□□□□ 0.18
RRP1B-201ENST00000340648 GUCY1A3Q02108 690 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 MUM1L1Q5H9M0 696 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 OGFOD1Q8N543 542 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 SH2D3CQ8N5H7 860 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 RUNDC3BQ96NL0 473 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 A0A1W2PQC6 194 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 ACTN3Q08043 901 aaPredicted RBP16.16■□□□□ 0.18
RRP1B-201ENST00000340648 DPYDQ12882 1025 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 TBC1D1Q86TI0 1168 aaPredicted RBP16.16■□□□□ 0.18
RRP1B-201ENST00000340648 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 HPCAL4Q9UM19 191 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 K7ENM7 598 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 MYL7Q01449 175 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 UBE2SQ16763 222 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 CHUKO15111 745 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 FGGP02679 453 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
RRP1B-201ENST00000340648 DR1Q01658 176 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 FAM186BQ8IYM0 893 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 GRK7Q8WTQ7 553 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 VIPAS39Q9H9C1 493 aa16.16■□□□□ 0.18
RRP1B-201ENST00000340648 SLC16A2P36021 539 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 SNX1Q13596 522 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
RRP1B-201ENST00000340648 SUSD4Q5VX71 490 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 NLRP14Q86W24 1093 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 SPATA24Q86W54 205 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 ARHGAP24Q8N264 748 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 HSPA1LP34931 641 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 TXNRD1Q16881 649 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 UNC13DQ70J99 1090 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 PIGBQ92521 554 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 CCDC127Q96BQ5 260 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 BRIP1Q9BX63 1249 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 ZMYND12Q9H0C1 365 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 POTEMA6NI47 508 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
RRP1B-201ENST00000340648 PSMD2Q13200 908 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 FBXW10Q5XX13 1052 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 MSANTD4Q8NCY6 345 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 TFR2Q9UP52 801 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 FCER1AP12319 257 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 RCAN1P53805 252 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 KAZALD1Q96I82 304 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
RRP1B-201ENST00000340648 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
RRP1B-201ENST00000340648 PLA2G4BP0C869 781 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 LRCH2Q5VUJ6 765 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 ARHGEF10LQ9HCE6 1279 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 AGPAT5Q9NUQ2 364 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 CEP72Q9P209 647 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 ITIH6Q6UXX5 1313 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 MAGOHP61326 146 aaKnown RBP16.14■□□□□ 0.17
RRP1B-201ENST00000340648 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 C8orf37Q96NL8 207 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 POC1B-GALNT4F8VUJ3 575 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 PDE6CP51160 858 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 ODR4Q5SWX8 454 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 C10orf76Q5T2E6 689 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 CCNI2Q6ZMN8 369 aaPredicted RBP16.14■□□□□ 0.17
RRP1B-201ENST00000340648 TYW1Q9NV66 732 aaKnown RBP16.14■□□□□ 0.17
RRP1B-201ENST00000340648 TBK1Q9UHD2 729 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 I3L4J1 428 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 RASGRF2O14827 1237 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 ATF7P17544 494 aaPredicted RBP16.14■□□□□ 0.17
RRP1B-201ENST00000340648 KCTD1Q719H9 257 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 TAB3Q8N5C8 712 aaPredicted RBP16.14■□□□□ 0.17
RRP1B-201ENST00000340648 GDAP1Q8TB36 358 aa16.14■□□□□ 0.17
RRP1B-201ENST00000340648 UBE2Q2LH0YL09 131 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 MMEP08473 750 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms