RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 TNFAIP2Q03169 654 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 ZSCAN23Q3MJ62 389 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 RHPN2Q8IUC4 686 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 MLKLQ8NB16 471 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 RFX7Q2KHR2 1363 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 TYW5A2RUC4 315 aaKnown RBP14.11□□□□□ -0.15
LIN54-201ENST00000340417 UPP2O95045 317 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 GGPS1O95749 300 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 FAM193AP78312 1265 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 PTPN14Q15678 1187 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
LIN54-201ENST00000340417 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
LIN54-201ENST00000340417 CTSHP09668 335 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 LACTBP83111 547 aaPredicted RBP14.11□□□□□ -0.15
LIN54-201ENST00000340417 NFIAQ12857 509 aa14.11□□□□□ -0.15
LIN54-201ENST00000340417 PSPC1Q8WXF1 523 aaKnown RBP14.11□□□□□ -0.15
LIN54-201ENST00000340417 MYO1EQ12965 1108 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 NR5A1Q13285 461 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 SLC39A2Q9NP94 309 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 PRR12Q9ULL5 1215 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 PXDNLA1KZ92 1463 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 KRT83P78385 493 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
LIN54-201ENST00000340417 FAM117BQ6P1L5 589 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 RSRC2Q7L4I2 434 aaKnown RBP14.1□□□□□ -0.15
LIN54-201ENST00000340417 CXCL11O14625 94 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 ADCY5O95622 1261 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
LIN54-201ENST00000340417 DISC1Q9NRI5 854 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 TOPORSQ9NS56 1045 aaPredicted RBP14.1□□□□□ -0.15
LIN54-201ENST00000340417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.1□□□□□ -0.15
LIN54-201ENST00000340417 RGS12O14924 1447 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 OATP04181 439 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 MTRQ99707 1265 aa14.1□□□□□ -0.15
LIN54-201ENST00000340417 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
LIN54-201ENST00000340417 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 CCDC114Q96M63 670 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIN54-201ENST00000340417 TMEM206Q9H813 350 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 KIF2AO00139 706 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 URI1O94763 535 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 EZRP15311 586 aaKnown RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 KIF5AQ12840 1032 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 MROH8Q9H579 483 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 PPP4CP60510 307 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 GABPAQ06546 454 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 MAPK6Q16659 721 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 ARMCX3Q9UH62 379 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 CCDC113Q9H0I3 377 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 MAGEF1Q9HAY2 307 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 TACC1O75410 805 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIN54-201ENST00000340417 CYFIP1Q7L576 1253 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 JPH1Q9HDC5 661 aaPredicted RBP14.09□□□□□ -0.15
LIN54-201ENST00000340417 PHLPP2Q6ZVD8 1323 aa14.09□□□□□ -0.15
LIN54-201ENST00000340417 SPOPO43791 374 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 DACT2Q5SW24 774 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 THEM5Q8N1Q8 247 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 SCFD2Q8WU76 684 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 PARVGQ9HBI0 331 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 IKBKGQ9Y6K9 419 aa14.08□□□□□ -0.15
LIN54-201ENST00000340417 COL14A1Q05707 1796 aaKnown RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 FKTNO75072 461 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 PSMC4P43686 418 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 SRRTQ9BXP5 876 aaKnown RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 KCNQ5Q9NR82 932 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 TMEM260Q9NX78 707 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 DPYSL4O14531 572 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 VIL1P09327 827 aaKnown RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 STAT5BP51692 787 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 PEX3P56589 373 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 MSTO1Q9BUK6 570 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 NWD1Q149M9 1564 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 PFKFB1P16118 471 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 RASA1P20936 1047 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 ARL1P40616 181 aaPredicted RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 ADAM9Q13443 819 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 PNOCQ13519 176 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 DGKDQ16760 1214 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 UVSSAQ2YD98 709 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 ZNF668Q96K58 619 aaPredicted RBP14.08□□□□□ -0.16
LIN54-201ENST00000340417 CSRNP2Q9H175 543 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 POLR3EQ9NVU0 708 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
LIN54-201ENST00000340417 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
LIN54-201ENST00000340417 PLA2G4BP0C869 781 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms