RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 TRIM17Q9Y577 477 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 KIAA1217Q5T5P2 1943 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 SPATA31C2B4DYI2 1134 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 FIBPO43427 364 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 BAG4O95429 457 aaKnown RBP20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 ETNPPLQ8TBG4 499 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 RAET1EQ8TD07 263 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 PXYLP1Q8TE99 480 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 TRIB2Q92519 343 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 FAM20AQ96MK3 541 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 MTMR9Q96QG7 549 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 ABHD16BQ9H3Z7 469 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 KCNH7Q9NS40 1196 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 RCOR1Q9UKL0 485 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 CNPY2Q9Y2B0 182 aa20.26■□□□□ 0.83
SDCBP2-201ENST00000339987 RBM47A0AV96 593 aaKnown RBP20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 MSH4O15457 936 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 ADCY3O60266 1144 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 OR52Z1P0C646 297 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 ARP10275 920 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 PRPHP41219 470 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 SEMA3FQ13275 785 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 STK38Q15208 465 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 CALCRLQ16602 461 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 ARL6IP4Q66PJ3 421 aaKnown RBP20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 KCNV1Q6PIU1 500 aa20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 FBXO16Q8IX29 292 aaPredicted RBP20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 AGO4Q9HCK5 861 aaKnown RBP20.25■□□□□ 0.83
SDCBP2-201ENST00000339987 TCHHQ07283 1943 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 TGFB3P10600 412 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 CYP2C19P33261 490 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 SEPT14Q6ZU15 432 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 EEPD1Q7L9B9 569 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 SLFN12Q8IYM2 578 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 LEO1Q8WVC0 666 aaPredicted RBP20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 HAS1Q92839 578 aa20.24■□□□□ 0.83
SDCBP2-201ENST00000339987 SPTLC2O15270 562 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 PPP6R2O75170 966 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 LBX1P52954 281 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 ACVR2BQ13705 512 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 TAPT1Q6NXT6 567 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 SLAIN1Q8ND83 568 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 SPATA32Q96LK8 384 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 GBP4Q96PP9 640 aa20.23■□□□□ 0.83
SDCBP2-201ENST00000339987 IPO5O00410 1097 aaKnown RBP20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 HMGCRP04035 888 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 FERMT2Q96AC1 680 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 RIT2Q99578 217 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 SENP7Q9BQF6 1050 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 ZNF577Q9BSK1 485 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 PTPN22Q9Y2R2 807 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 MRVI1Q9Y6F6 885 aa20.22■□□□□ 0.83
SDCBP2-201ENST00000339987 MARCH6O60337 910 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 ELNP15502 786 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 KCNA2P16389 499 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 TTLL4Q14679 1199 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 CCDC62Q6P9F0 684 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 CTU1Q7Z7A3 348 aaKnown RBP20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 ZHX1Q9UKY1 873 aaPredicted RBP20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 PTCH2Q9Y6C5 1203 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 NFASCO94856 1347 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 ELP1O95163 1332 aa20.21■□□□□ 0.83
SDCBP2-201ENST00000339987 CYBAP13498 195 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 IQSEC1Q6DN90 963 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 DTHD1Q6ZMT9 781 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 GIMAP8Q8ND71 665 aaPredicted RBP20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 PDGFCQ9NRA1 345 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 TBC1D22BQ9NU19 505 aa20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 DDX41Q9UJV9 622 aaKnown RBP20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 SRPRBQ9Y5M8 271 aaKnown RBP20.2■□□□□ 0.82
SDCBP2-201ENST00000339987 DHX15O43143 795 aaKnown RBP20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 GAS7O60861 476 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 ATP9AO75110 1047 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 PSMD10O75832 226 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 GRK4P32298 578 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 TXKP42681 527 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 ITGB3BPQ13352 177 aaPredicted RBP20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 NEDD9Q14511 834 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 PRAMEF19Q5SWL8 479 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 LRCH2Q5VUJ6 765 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 TNS4Q8IZW8 715 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 KRI1Q8N9T8 703 aaKnown RBP20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 GDPD2Q9HCC8 539 aa20.19■□□□□ 0.82
SDCBP2-201ENST00000339987 ARIH2O95376 493 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms