RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 MYMKA6NI61 221 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 RAD21O60216 631 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
LITAF-201ENST00000339430 TTLL1O95922 423 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 ABCB5Q2M3G0 1257 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 CEP112Q8N8E3 955 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 NOC4LQ9BVI4 516 aaKnown RBP18.17■□□□□ 0.5
LITAF-201ENST00000339430 TBC1D8O95759 1140 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 JAG1P78504 1218 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 CCDC96Q2M329 555 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 TMEM266Q2M3C6 531 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 ANGEL2Q5VTE6 544 aaKnown RBP18.17■□□□□ 0.5
LITAF-201ENST00000339430 CNNM4Q6P4Q7 775 aa18.17■□□□□ 0.5
LITAF-201ENST00000339430 SNHG28P0DPA3 235 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 ERCC3P19447 782 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 HIRAP54198 1017 aaPredicted RBP18.16■□□□□ 0.5
LITAF-201ENST00000339430 HERVK_113P62684 666 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 SEPT2Q15019 361 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 SNX29Q8TEQ0 813 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 LARP4BQ92615 738 aaKnown RBP18.16■□□□□ 0.5
LITAF-201ENST00000339430 PKNOX2Q96KN3 472 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 DEFB129Q9H1M3 183 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 MYH7BA7E2Y1 1941 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 GREB1LQ9C091 1923 aaPredicted RBP18.16■□□□□ 0.5
LITAF-201ENST00000339430 IDEP14735 1019 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 SEMA3FQ13275 785 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 MIIPQ5JXC2 388 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 TTYH3Q9C0H2 523 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 ARFGAP3Q9NP61 516 aa18.16■□□□□ 0.5
LITAF-201ENST00000339430 hCG_1984214I3L0E3 225 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 ENC1O14682 589 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 GH2P01242 217 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
LITAF-201ENST00000339430 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 KCNK18Q7Z418 384 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 FAM114A1Q8IWE2 563 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 ZNF713Q8N859 430 aaPredicted RBP18.15■□□□□ 0.5
LITAF-201ENST00000339430 ANKZF1Q9H8Y5 726 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 KANSL2Q9H9L4 492 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 GRIN3BO60391 1043 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 ZBTB9Q96C00 473 aa18.15■□□□□ 0.5
LITAF-201ENST00000339430 POLR3GO15318 223 aaPredicted RBP18.14■□□□□ 0.49
LITAF-201ENST00000339430 TBC1D12O60347 775 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 RHOXF2BP0C7M4 288 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 EEF2P13639 858 aaKnown RBP18.14■□□□□ 0.49
LITAF-201ENST00000339430 ORC2Q13416 577 aaPredicted RBP18.14■□□□□ 0.49
LITAF-201ENST00000339430 CCDC122Q5T0U0 273 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 GPIHBP1Q8IV16 184 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 GLIS3Q8NEA6 775 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 PNKPQ96T60 521 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 RHOXF2Q9BQY4 288 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 RIC8AQ9NPQ8 531 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 GGA3Q9NZ52 723 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 MYO1AQ9UBC5 1043 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 HDAC6Q9UBN7 1215 aa18.14■□□□□ 0.49
LITAF-201ENST00000339430 LRRC41Q15345 812 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 ECM1Q16610 540 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 KIAA1328Q86T90 577 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 MYO6Q9UM54 1294 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 MARCH6O60337 910 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 ICA1Q05084 483 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 KRT79Q5XKE5 535 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 CENPPQ6IPU0 288 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 UNC13DQ70J99 1090 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 SIAH1Q8IUQ4 282 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 RAD54LQ92698 747 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 RAB34Q9BZG1 259 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 NHEJ1Q9H9Q4 299 aaPredicted RBP18.13■□□□□ 0.49
LITAF-201ENST00000339430 ZNHIT6Q9NWK9 470 aaKnown RBP18.13■□□□□ 0.49
LITAF-201ENST00000339430 STK17AQ9UEE5 414 aa18.13■□□□□ 0.49
LITAF-201ENST00000339430 DDX25Q9UHL0 483 aaKnown RBP18.13■□□□□ 0.49
LITAF-201ENST00000339430 SOCS7O14512 581 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 MEA1Q16626 185 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 LONRF2Q1L5Z9 754 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 DDX12PQ92771 950 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 CUL5Q93034 780 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 NUP58Q9BVL2 599 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 RCCD1A6NED2 376 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 PPP1R2P41236 205 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 CYP27A1Q02318 531 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 FKBP15Q5T1M5 1219 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 NBPF12Q5TAG4 269 aaPredicted RBP18.12■□□□□ 0.49
LITAF-201ENST00000339430 PRAMEF18Q5VWM3 479 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
LITAF-201ENST00000339430 HAUS4Q9H6D7 363 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 ADARB2Q9NS39 739 aaKnown RBP18.12■□□□□ 0.49
LITAF-201ENST00000339430 NYAP2Q9P242 653 aa18.12■□□□□ 0.49
LITAF-201ENST00000339430 CTAGE15A4D2H0 777 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 CTAGE8P0CG41 777 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 ZBED6P86452 979 aa18.11■□□□□ 0.49
LITAF-201ENST00000339430 AMPD2Q01433 879 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms