RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 LUC7L2Q9Y383 392 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP1-201ENST00000339269 POTEB3A0JP26 581 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTECB2RU33 542 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 E9PMD0 336 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 MED24O75448 989 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZNF569Q5MCW4 686 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SYDE2Q5VT97 1194 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CC2D2BQ6DHV5 1058 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FOXR2Q6PJQ5 311 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTEBQ6S5H4 581 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 MOXD1Q6UVY6 613 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 RTKN2Q8IZC4 609 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PCDHA12Q9UN75 941 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 TFR2Q9UP52 801 aa14.46□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 RCCD1A6NED2 376 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZRANB2O95218 330 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ARHGAP4P98171 946 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 AMPD2Q01433 879 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 TBC1D8BQ0IIM8 1120 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 AP3B2Q13367 1082 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FIGNQ5HY92 759 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 MNS1Q8NEH6 495 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 GLT8D2Q9H1C3 349 aa14.45□□□□□ -0.1
CDK5RAP1-201ENST00000339269 NPHP3-ACAD11A0A0J9YXS1 232 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 A0A1W2PQJ5 194 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FRMD3A2A2Y4 597 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FAM86B1E9PN63 330 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 RAD21O60216 631 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 KIF5CO60282 957 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FAM86B2P0C5J1 330 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 YY1P25490 414 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 MTIF2P46199 727 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ARSHQ5FYA8 562 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FAM114A1Q8IWE2 563 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 UBXN4Q92575 508 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 RNF181Q9P0P0 153 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FHOD1Q9Y613 1164 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ABCB11O95342 1321 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 TULP1O00294 542 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PES1O00541 588 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PPIP5K2O43314 1243 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PLA2G4BP0C869 781 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 IDEP14735 1019 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CYP11B2P19099 503 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 LMNB1P20700 586 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SREBF1P36956 1147 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ECE1P42892 770 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PRELPP51888 382 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SLC12A3P55017 1021 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZBED6P86452 979 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 LRRC63Q05C16 580 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 Q4G0T1 1027 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 VWA3BQ502W6 1294 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 AMNQ9BXJ7 453 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CDC23Q9UJX2 597 aa14.44□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZNF263O14978 683 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SPATA31C1P0DKV0 1188 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 BMP3P12645 472 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 HNRNPH3P31942 346 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PSMD2Q13200 908 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZNF662Q6ZS27 426 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FBXO11Q86XK2 927 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ACER1Q8TDN7 264 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 KIAA1024Q9UPX6 916 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 LTBP3Q9NS15 1303 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 KDM3AQ9Y4C1 1321 aa14.43□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTEFA5A3E0 1075 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SLC26A4O43511 780 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTEIP0CG38 1075 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CIITAP33076 1130 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CDK17Q00537 523 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 USH1GQ495M9 461 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 GRIPAP1Q4V328 841 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 SMAP1Q8IYB5 467 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 NUP58Q9BVL2 599 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 NDST4Q9H3R1 872 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PANK4Q9NVE7 773 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 VAV3Q9UKW4 847 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CLRN2A0PK11 232 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 HOXA7P31268 230 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 PSMC6P62333 389 aa14.42□□□□□ -0.1
CDK5RAP1-201ENST00000339269 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms