RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 GNL1P36915 607 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PEX5P50542 639 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 COBLL1Q53SF7 1204 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 IL23RQ5VWK5 629 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TBC1D9BQ66K14 1250 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 HAUS3Q68CZ6 603 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PRR23CQ6ZRP0 262 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TOGARAM2Q6ZUX3 1019 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 INTS8Q75QN2 995 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TRPM8Q7Z2W7 1104 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PIGOQ8TEQ8 1089 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 EME1Q96AY2 570 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TMCC3Q9ULS5 477 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 LEMD3Q9Y2U8 911 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CENPBD1B2RD01 187 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 KRT75O95678 551 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 BCL2A1Q16548 175 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 SGO2Q562F6 1265 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ZBTB41Q5SVQ8 909 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 B3GNT6Q6ZMB0 384 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ZNF662Q6ZS27 426 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 DGCR14Q96DF8 476 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CFAP57Q96MR6 1250 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 DCLRE1BQ9H816 532 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GIN1Q9NXP7 522 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PLK2Q9NYY3 685 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 AIPL1Q9NZN9 384 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CHPF2Q9P2E5 772 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 APOBEC2Q9Y235 224 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 HBS1LQ9Y450 684 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 NOS1P29475 1434 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TSPAN1O60635 241 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 LMNB1P20700 586 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 SLC35F6Q8N357 371 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ZFRQ96KR1 1074 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ECT2Q9H8V3 914 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 PFDN4Q9NQP4 134 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ZNF180Q9UJW8 692 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 MED14O60244 1454 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ARPC4-TTLL3A0A0A6YYG9 625 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GOLGA8QA0A0J9YX86 632 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GOLGA8OA6NCC3 632 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GOLGA8NF8WBI6 632 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GOLGA8RI6L899 631 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CNOT3O75175 753 aaKnown RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 GNAT2P19087 354 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 KIF11P52732 1056 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 FBLN2P98095 1184 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TFAP4Q01664 338 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TBX2Q13207 712 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TTC23LQ6PF05 361 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TRAPPC11Q7Z392 1133 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CYP2U1Q7Z449 544 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ASAP3Q8TDY4 903 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 ATL1Q8WXF7 558 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 EVI5LQ96CN4 794 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 TMBIM4Q9HC24 238 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 SCINQ9Y6U3 715 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 WDR17Q8IZU2 1322 aa4.51□□□□□ -1.69
NEDD4-201ENST00000338963 DENND4BO75064 1496 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-201ENST00000338963 CCDC169A6NNP5 214 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 GUCY1B2O75343 617 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ZWINTO95229 277 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 LDHAP00338 332 aaKnown RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 SERPINB6P35237 376 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ATP1A2P50993 1020 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 GJA9P57773 515 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 COX10Q12887 443 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 MSLNQ13421 630 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 TMTC3Q6ZXV5 915 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 BPHLQ86WA6 291 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 MINDY2Q8NBR6 621 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 TMEM237Q96Q45 408 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ESF1Q9H501 851 aaKnown RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 CD209Q9NNX6 404 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 STK39Q9UEW8 545 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 PTCH1Q13635 1447 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ASXL2Q76L83 1435 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 PRAG1Q86YV5 1406 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 TRAPPC8Q9Y2L5 1435 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 MCF2LO15068 1137 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 VAV1P15498 845 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ECE1P42892 770 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 RCN2Q14257 317 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 PPP2R5EQ16537 467 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 CHMP7Q8WUX9 453 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-201ENST00000338963 DPF3Q92784 378 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 TESK2Q96S53 571 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ARL2BPQ9Y2Y0 163 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 AFF2P51816 1311 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 ITIH6Q6UXX5 1313 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 JCADQ9P266 1359 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 STAT2P52630 851 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 BPIFB4P59827 614 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 SPA17Q15506 151 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 LRGUKQ96M69 825 aa4.5□□□□□ -1.69
NEDD4-201ENST00000338963 OLFM1Q99784 485 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms