RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
SEC13-201ENST00000337354 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 GNEQ9Y223 722 aaKnown RBP17.48■□□□□ 0.39
SEC13-201ENST00000337354 FAM86B1E9PN63 330 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 EDIL3O43854 480 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 SGPL1O95470 568 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 FAM86B2P0C5J1 330 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
SEC13-201ENST00000337354 NEDD9Q14511 834 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 LETM2Q2VYF4 491 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 Q4G0T1 1027 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 MBOAT7Q96N66 472 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 KCNH7Q9NS40 1196 aa17.47■□□□□ 0.39
SEC13-201ENST00000337354 NOL7Q9UMY1 257 aaKnown RBP17.47■□□□□ 0.39
SEC13-201ENST00000337354 IGLV3-22A0A075B6J6 115 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 VPS37CA5D8V6 355 aaPredicted RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 EN2P19622 333 aaPredicted RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 GJA8P48165 433 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 RGS19P49795 217 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 NKX3-2P78367 333 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 PLA2G4DQ86XP0 818 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 AP5M1Q9H0R1 490 aa17.46■□□□□ 0.39
SEC13-201ENST00000337354 ZSCAN16Q9H4T2 348 aaPredicted RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
SEC13-201ENST00000337354 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
SEC13-201ENST00000337354 ARIH2O95376 493 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 GH1P01241 217 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 GJA9P57773 515 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 ORC2Q13416 577 aaPredicted RBP17.45■□□□□ 0.38
SEC13-201ENST00000337354 LAMC2Q13753 1193 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 LY6KQ17RY6 165 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 PRR16Q569H4 304 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
SEC13-201ENST00000337354 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 XPNPEP3Q9NQH7 507 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
SEC13-201ENST00000337354 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 MTMR6Q9Y217 621 aa17.45■□□□□ 0.38
SEC13-201ENST00000337354 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 ARP10275 920 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 SP2Q02086 613 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 SEMA3FQ13275 785 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 CELF3Q5SZQ8 465 aaKnown RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 RNF180Q86T96 592 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 AGO4Q9HCK5 861 aaKnown RBP17.44■□□□□ 0.38
SEC13-201ENST00000337354 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 MCM3APO60318 1980 aa17.44■□□□□ 0.38
SEC13-201ENST00000337354 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 TBX3O15119 743 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 ADCY6O43306 1168 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 TDP2O95551 362 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
SEC13-201ENST00000337354 BRDTQ58F21 947 aaPredicted RBP17.43■□□□□ 0.38
SEC13-201ENST00000337354 MYSM1Q5VVJ2 828 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 LENG9Q96B70 501 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 MLXIPQ9HAP2 919 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 NFASCO94856 1347 aa17.43■□□□□ 0.38
SEC13-201ENST00000337354 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
SEC13-201ENST00000337354 ATP9AO75110 1047 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 ADAMTS4O75173 837 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 GGPS1O95749 300 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 KCNA2P16389 499 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 CPT1AP50416 773 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 METTL7BQ6UX53 244 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 OR6J1Q8NGC5 347 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 FAM20AQ96MK3 541 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 RIT2Q99578 217 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 LCTP09848 1927 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 SYNRGQ9UMZ2 1314 aa17.42■□□□□ 0.38
SEC13-201ENST00000337354 A6NJR5 290 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 ZEB2O60315 1214 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 PGK1P00558 417 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 CST5P28325 142 aaPredicted RBP17.41■□□□□ 0.38
SEC13-201ENST00000337354 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 TTC38Q5R3I4 469 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 PCSK9Q8NBP7 692 aaKnown RBP17.41■□□□□ 0.38
SEC13-201ENST00000337354 KLHDC9Q8NEP7 349 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 COPS5Q92905 334 aa17.41■□□□□ 0.38
SEC13-201ENST00000337354 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
SEC13-201ENST00000337354 DNM1LO00429 736 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms