RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CICQ96RK0 1608 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 ADCY7P51828 1080 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 MAN2A1Q16706 1144 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 MIIPQ5JXC2 388 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 SLC10A5Q5PT55 438 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 KCNV1Q6PIU1 500 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 DMGDHQ9UI17 866 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 ZNF263O14978 683 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 RDXP35241 583 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 SNX12Q9UMY4 172 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 RAPGEF1Q13905 1077 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 ARMC3Q5W041 872 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 GLIS3Q8NEA6 775 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
CDC42EP4-201ENST00000335793 ANO9A1A5B4 782 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 M0R2N6 131 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 DAGLBQ8NCG7 672 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 SPATA4Q8NEY3 305 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 ERGIC2Q96RQ1 377 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 MKRN1Q9UHC7 482 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 FAM170AA1A519 330 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 MYO1FO00160 1098 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 SLC37A4O43826 429 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 SLC16A2P36021 539 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 POLR2FP61218 127 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 OSBPL9Q96SU4 736 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 NUDT12Q9BQG2 462 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 EHD4Q9H223 541 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 HYOU1Q9Y4L1 999 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 CAPN7Q9Y6W3 813 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 FLT1P17948 1338 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 PEX19P40855 299 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 UNC13DQ70J99 1090 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 NOX5Q96PH1 765 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 SPZ1Q9BXG8 430 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 TTYH3Q9C0H2 523 aa18.22■□□□□ 0.51
CDC42EP4-201ENST00000335793 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 GRB10Q13322 594 aa18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 HERC4Q5GLZ8 1057 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 MYOCDQ8IZQ8 938 aa18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 MS4A14Q96JA4 679 aa18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 MMTAG2Q9BU76 263 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 THRAP3Q9Y2W1 955 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 ANKRD36CQ5JPF3 1778 aa18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 ACTN3Q08043 901 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 LUC7LQ9NQ29 371 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.51
CDC42EP4-201ENST00000335793 COL4A1P02462 1669 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 TCP1P17987 556 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 SLC9C1Q4G0N8 1177 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 SH2D4AQ9H788 454 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 FTCDO95954 541 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 KCTD16Q68DU8 428 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 CENPPQ6IPU0 288 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 LSM14BQ9BX40 385 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 PCDHA12Q9UN75 941 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 ESYT3A0FGR9 886 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 TARSL2A2RTX5 802 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 G3V3G9 751 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 HSF2BPO75031 334 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 NF2P35240 595 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 SLC1A4P43007 532 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
CDC42EP4-201ENST00000335793 PPFIA4O75335 1185 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 TCERG1LQ5VWI1 586 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 VIPAS39Q9H9C1 493 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 PANK4Q9NVE7 773 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 PACSIN2Q9UNF0 486 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 FAM169AQ9Y6X4 670 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 APBA1Q02410 837 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 FAM26FQ5R3K3 315 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 SFMBT2Q5VUG0 894 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 CREG2Q8IUH2 290 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 CD209Q9NNX6 404 aa18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 DDX25Q9UHL0 483 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-201ENST00000335793 ZEB2O60315 1214 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 KCNK18Q7Z418 384 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms