RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 VCAM1P19320 739 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 ASIC1P78348 528 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 ARID5AQ03989 594 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
HDAC6-201ENST00000334136 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 GLG1Q92896 1179 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 USP27XA6NNY8 438 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GUCY1A2P33402 732 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SYCP1Q15431 976 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 TERF2Q15554 542 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CNGA4Q8IV77 575 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GMCL1Q96IK5 515 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 NEFHP12036 1026 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 FKBP1BP68106 108 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 AP3B2Q13367 1082 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CHD4Q14839 1912 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 PALM3A6NDB9 673 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 ZBTB22O15209 634 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CCND2P30279 289 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 TECP42680 631 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CLCN6P51797 869 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CEP57Q86XR8 500 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 NAPGQ99747 312 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SMARCA1P28370 1054 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 KRT9P35527 623 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 OTUD6BQ8N6M0 293 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GMCL1P1Q8NEA9 526 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 MMP19Q99542 508 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
HDAC6-201ENST00000334136 DDX41Q9UJV9 622 aaKnown RBP13.06□□□□□ -0.32
HDAC6-201ENST00000334136 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 KCNF1Q9H3M0 494 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 EXOC1Q9NV70 894 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 TAF1P21675 1872 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 PSMA7O14818 248 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 GYS2P54840 703 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 MANSC4A6NHS7 340 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-201ENST00000334136 IRF6O14896 467 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 ERCC3P19447 782 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 GABPAQ06546 454 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
HDAC6-201ENST00000334136 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
HDAC6-201ENST00000334136 ATP1A3P13637 1013 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 HOXD10P28358 340 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 KMT5BQ4FZB7 885 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 AFAP1L1Q8TED9 768 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 ZNF577Q9BSK1 485 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 NOD1Q9Y239 953 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 TACC1O75410 805 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 CABP7Q86V35 215 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 BAATQ14032 418 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 POSTNQ15063 836 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 TSG101Q99816 390 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms