RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CCDC17Q96LX7 622 aa21.03■□□□□ 0.96
RFTN1-201ENST00000334133 GTPBP4Q9BZE4 634 aaKnown RBP21.03■□□□□ 0.96
RFTN1-201ENST00000334133 BCAS3Q9H6U6 928 aa21.03■□□□□ 0.96
RFTN1-201ENST00000334133 NLRC4Q9NPP4 1024 aa21.03■□□□□ 0.96
RFTN1-201ENST00000334133 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.03■□□□□ 0.96
RFTN1-201ENST00000334133 CTAGE15A4D2H0 777 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 MEIS2O14770 477 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 CTAGE8P0CG41 777 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 PSMC6P62333 389 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 PPP1R18Q6NYC8 613 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 LRRC55Q6ZSA7 311 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 CTAGE6Q86UF2 777 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 GPBP1Q86WP2 473 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 CTAGE4Q8IX94 777 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 CCDC42Q96M95 316 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 HAUS4Q9H6D7 363 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 SMCHD1A6NHR9 2005 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 COL11A2P13942 1736 aaPredicted RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 ZNF185O15231 689 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 IPO7O95373 1038 aaKnown RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 PLA2G4BP0C869 781 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 CYLC1P35663 651 aaPredicted RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 ENOX2Q16206 610 aaKnown RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 LONRF2Q1L5Z9 754 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 HERC4Q5GLZ8 1057 aaPredicted RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 MYOCDQ8IZQ8 938 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 ANKRD13CQ8N6S4 541 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 PRMT6Q96LA8 375 aaPredicted RBP21.02■□□□□ 0.96
RFTN1-201ENST00000334133 ERGIC2Q96RQ1 377 aa21.02■□□□□ 0.96
RFTN1-201ENST00000334133 NDUFB10O96000 172 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 KRT18P05783 430 aaKnown RBP21.01■□□□□ 0.95
RFTN1-201ENST00000334133 AMPD2Q01433 879 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 CYP4A11Q02928 519 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 ABCB5Q2M3G0 1257 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 FAM26FQ5R3K3 315 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 NUP58Q9BVL2 599 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 ARHGAP20Q9P2F6 1191 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 SIK3Q9Y2K2 1263 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 GYS2P54840 703 aa21.01■□□□□ 0.95
RFTN1-201ENST00000334133 CLRN2A0PK11 232 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 LRRC53A6NM62 1247 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 H0YIN7 160 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 STRIP1Q5VSL9 837 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 PSMB7Q99436 277 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 EHD4Q9H223 541 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 VSNL1P62760 191 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 KRT83P78385 493 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 ARHGAP4P98171 946 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 PABPC4Q13310 644 aaKnown RBP eCLIP21■□□□□ 0.95
RFTN1-201ENST00000334133 MAN2A1Q16706 1144 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 CCDC40Q4G0X9 1142 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 MMS19Q96T76 1030 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 FUT8Q9BYC5 575 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 A0A1W2PRG0 241 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 ERICH4A6NGS2 130 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 TCP10L2B9ZVM9 353 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 EIF4A3P38919 411 aaKnown RBP21■□□□□ 0.95
RFTN1-201ENST00000334133 DEF6Q9H4E7 631 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 MLXIPQ9HAP2 919 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 MYO3BQ8WXR4 1341 aa21■□□□□ 0.95
RFTN1-201ENST00000334133 ECE1P42892 770 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 GABPB1Q06547 395 aaPredicted RBP20.99■□□□□ 0.95
RFTN1-201ENST00000334133 EHHADHQ08426 723 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 DHX36Q9H2U1 1008 aaKnown RBP20.99■□□□□ 0.95
RFTN1-201ENST00000334133 FAM86B1E9PN63 330 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 KRT86O43790 486 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 ZMYND10O75800 440 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 FAM86B2P0C5J1 330 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 PPP1R2P41236 205 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 UBXN2AP68543 259 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 SEMA3FQ13275 785 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 ZYXQ15942 572 aaKnown RBP20.99■□□□□ 0.95
RFTN1-201ENST00000334133 RETREG2Q8NC44 543 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 TSG101Q99816 390 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 ABCB6Q9NP58 842 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 BMP2KQ9NSY1 1161 aaPredicted RBP20.99■□□□□ 0.95
RFTN1-201ENST00000334133 NYAP2Q9P242 653 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 MYO1AQ9UBC5 1043 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 NRXN2Q9P2S2 1712 aa20.99■□□□□ 0.95
RFTN1-201ENST00000334133 CASP5P51878 434 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 ARID5AQ03989 594 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 UTP14CQ5TAP6 766 aaKnown RBP20.98■□□□□ 0.95
RFTN1-201ENST00000334133 CSRNP1Q96S65 589 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 SCAF8Q9UPN6 1271 aaKnown RBP20.98■□□□□ 0.95
RFTN1-201ENST00000334133 TBC1D5Q92609 795 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 ARFGEF1Q9Y6D6 1849 aa20.98■□□□□ 0.95
RFTN1-201ENST00000334133 GCFC2P16383 781 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 CYP11B2P19099 503 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 LRRC63Q05C16 580 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 SMC1AQ14683 1233 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 SPA17Q15506 151 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 WHAMMP3Q1A5X7 153 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 CACNA2D4Q7Z3S7 1137 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 FBXO11Q86XK2 927 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 CATSPER3Q86XQ3 398 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 AMNQ9BXJ7 453 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 KCNMB3Q9NPA1 279 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 SAR1BQ9Y6B6 198 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 SLX4Q8IY92 1834 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms