RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 UNC13DQ70J99 1090 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 TBC1D16Q8TBP0 767 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 BAP1Q92560 729 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
VPS33B-201ENST00000333371 USO1O60763 962 aaKnown RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 IL1R1P14778 569 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 HOXA10P31260 410 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 MAGEA1P43355 309 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 PICALMQ13492 652 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 AENQ8WTP8 325 aaKnown RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 ZSCAN5CA6NGD5 496 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 NAP1L1P55209 391 aaKnown RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 CDK17Q00537 523 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 ARID5AQ03989 594 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 TDRD12Q587J7 1177 aaKnown RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 DNAJC21Q5F1R6 531 aaKnown RBP13.65□□□□□ -0.22
VPS33B-201ENST00000333371 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 GOLGA6L1Q8N7Z2 621 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 LZTS2Q9BRK4 669 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
VPS33B-201ENST00000333371 MYH4Q9Y623 1939 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 GOLGA6BA6NDN3 693 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 PDHBP11177 359 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 HNRNPH3P31942 346 aaKnown RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 RNASE9P60153 205 aaKnown RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 TSEN2Q8NCE0 465 aaKnown RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 RASSF4Q9H2L5 321 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 ZNF287Q9HBT7 754 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 RIMBP2O15034 1052 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 IVLP07476 585 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 PLCG2P16885 1265 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 MCM3P25205 808 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 DNAAF5Q86Y56 855 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 RAD54LQ92698 747 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
VPS33B-201ENST00000333371 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
VPS33B-201ENST00000333371 ESYT3A0FGR9 886 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 TLR2O60603 784 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 SLC16A2P36021 539 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 NT5C2P49902 561 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 RHBDL3P58872 404 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 PROM2Q8N271 834 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 TLR10Q9BXR5 811 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 FAM184BQ9ULE4 1060 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-201ENST00000333371 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-201ENST00000333371 RPS6KA5O75582 802 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 AKR1B1P15121 316 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 ADCY7P51828 1080 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 PDE4CQ08493 712 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 PTPROQ16827 1216 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 GUF1Q8N442 669 aaKnown RBP13.63□□□□□ -0.23
VPS33B-201ENST00000333371 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
VPS33B-201ENST00000333371 TRAF5O00463 557 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 FTCDO95954 541 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 ARFGEF1Q9Y6D6 1849 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 GOLGA6CA6NDK9 693 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 E9PMD0 336 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 NOL4O94818 638 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 GOLGA6DP0CG33 693 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS33B-201ENST00000333371 GTF2IP78347 998 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 COASYQ13057 564 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 ASTE1Q2TB18 679 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-201ENST00000333371 KRT79Q5XKE5 535 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-201ENST00000333371 GOLGA6AQ9NYA3 693 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 HYOU1Q9Y4L1 999 aa13.62□□□□□ -0.23
VPS33B-201ENST00000333371 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 LCA5LO95447 670 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 POLR2FP61218 127 aaKnown RBP13.61□□□□□ -0.23
VPS33B-201ENST00000333371 PPARDQ03181 441 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 TRADDQ15628 312 aa13.61□□□□□ -0.23
VPS33B-201ENST00000333371 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms