RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 GNGT1P63211 74 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 ADAM9Q13443 819 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 RDH13Q8NBN7 331 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
EFCAB13-201ENST00000331493 NID2Q14112 1375 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 CEP104O60308 925 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 UBXN2AP68543 259 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 LLGL1Q15334 1064 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 MIIPQ5JXC2 388 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 GALNT17Q6IS24 598 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 BCAS4Q8TDM0 211 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 LAD1O00515 517 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 KCNK3O14649 394 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 PALMO75781 387 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 FGRP09769 529 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 TUBB4BP68371 445 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 MEX3CQ5U5Q3 659 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 NEDD1Q8NHV4 660 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 LUC7LQ9NQ29 371 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 RBM12Q9NTZ6 932 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 SNX12Q9UMY4 172 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 ATP2C2O75185 946 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 LIG3P49916 1009 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
EFCAB13-201ENST00000331493 RASSF10A6NK89 507 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 KRT14P02533 472 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 TUBBP07437 444 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 PDHBP11177 359 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 CFAP58Q5T655 872 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 FGFBP2Q9BYJ0 223 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.32
EFCAB13-201ENST00000331493 HEXIM1O94992 359 aaKnown RBP13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 COASYQ13057 564 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 PNMA5Q96PV4 448 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 AP1M1Q9BXS5 423 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 PACSIN1Q9BY11 444 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 LEMD3Q9Y2U8 911 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 PDCLQ13371 301 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 RAD54LQ92698 747 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 CUL5Q93034 780 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 CUEDC2Q9H467 287 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 TMEM51Q9NW97 253 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.33
EFCAB13-201ENST00000331493 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 PLCG2P16885 1265 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 HOXA13P31271 388 aaPredicted RBP13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 USP8P40818 1118 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 RTFDC1Q9BY42 306 aaPredicted RBP13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 COL4A1P02462 1669 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 GDF11O95390 407 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 ABCB4P21439 1286 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 NR2F2P24468 414 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 CFAP221Q4G0U5 840 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 ITGB4P16144 1822 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 ECM1Q16610 540 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 PAPD7Q5XG87 772 aaKnown RBP13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SRLQ86TD4 932 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
EFCAB13-201ENST00000331493 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms