RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ANKIB1Q9P2G1 1089 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 LRP2BPQ9P2M1 347 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 PJA2O43164 708 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 AKR1B10O60218 316 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 MYL1P05976 194 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 PDHBP11177 359 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 GCFC2P16383 781 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 CCNE1P24864 410 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 HIBADHP31937 336 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 NLRP5P59047 1200 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 ANKRD40Q6AI12 368 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 MAATS1Q7Z4T9 603 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 RASSF8Q8NHQ8 419 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 MTMR8Q96EF0 704 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 PPANQ9NQ55 473 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 TSKSQ9UJT2 592 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 PLAAQ9Y263 795 aa19.98■□□□□ 0.79
CLSTN3-202ENST00000331148 BICDL2A1A5D9 508 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 ADAMTS3O15072 1205 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 EPHB6O15197 1021 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 KLRK1P26718 216 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 HPDP32754 393 aaPredicted RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 MAGEA1P43355 309 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 MIGA1Q8NAN2 632 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 TMBIM4Q9HC24 238 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 RNF14Q9UBS8 474 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 DDX20Q9UHI6 824 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 LEMD3Q9Y2U8 911 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 CCDC189A1A4V9 331 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 KLRG2A4D1S0 409 aaPredicted RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 PP2D1A8MPX8 630 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 MINDY4BA8MYZ0 360 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 NKRFO15226 690 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 HOXA10P31260 410 aaPredicted RBP19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 SEMA3FQ13275 785 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 SPRED3Q2MJR0 410 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 FAM228AQ86W67 206 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 CCDC50Q8IVM0 306 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 FUKQ8N0W3 1084 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 ARFGAP2Q8N6H7 521 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 C3orf20Q8ND61 904 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 NOX5Q96PH1 765 aa19.97■□□□□ 0.79
CLSTN3-202ENST00000331148 IBSPP21815 317 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 HSPA9P38646 679 aaKnown RBP19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 TROAPQ12815 778 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 CEP57Q86XR8 500 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 MAGEC3Q8TD91 643 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 OSBPL7Q9BZF2 842 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 KBTBD4Q9NVX7 518 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 ABCF2Q9UG63 623 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 SMIM22K7EJ46 135 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 BBOX1O75936 387 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 ANKRD20A8PQ5CZ79 823 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 SGSM3Q96HU1 749 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 FAM207AQ9NSI2 230 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 HAUS2Q9NVX0 235 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 SIK3Q9Y2K2 1263 aa19.96■□□□□ 0.79
CLSTN3-202ENST00000331148 GMNCA6NCL1 334 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 GOLGA6L10A6NI86 522 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 DNM1LO00429 736 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 BUB1O43683 1085 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 CALM1P0DP23 149 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 CALM2P0DP24 149 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 CALM3P0DP25 149 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 EN1Q05925 392 aaPredicted RBP19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 GPIHBP1Q8IV16 184 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 CAMKK2Q96RR4 588 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 CRAMP1Q96RY5 1269 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 PLIN2Q99541 437 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 BRIP1Q9BX63 1249 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 ANAPC4Q9UJX5 808 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 SCG2P13521 617 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 LRIG3Q6UXM1 1119 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 SRBD1Q8N5C6 995 aaKnown RBP19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 KRT12Q99456 494 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 PLCB1Q9NQ66 1216 aa19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 TPX2Q9ULW0 747 aaKnown RBP19.95■□□□□ 0.78
CLSTN3-202ENST00000331148 LRRC53A6NM62 1247 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 DDAH1O94760 285 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 SSBP05455 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 RASSF7Q02833 373 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 TRADDQ15628 312 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 TXNRD3Q86VQ6 643 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 RNF10Q8N5U6 811 aaKnown RBP19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 LRRC15Q8TF66 581 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 SLC12A6Q9UHW9 1150 aa19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 COL1A1P02452 1464 aaPredicted RBP19.94■□□□□ 0.78
CLSTN3-202ENST00000331148 GRID2IPA4D2P6 1211 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 TRAPPC3O43617 180 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 MMP10P09238 476 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 SLC1A4P43007 532 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 SATB1Q01826 763 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 SCLT1Q96NL6 688 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 IRS2Q9Y4H2 1338 aa19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 EZRP15311 586 aaKnown RBP19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 GFPT1Q06210 699 aaPredicted RBP19.93■□□□□ 0.78
CLSTN3-202ENST00000331148 CDC37Q16543 378 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms