RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GFPT1Q06210 699 aaPredicted RBP19.31■□□□□ 0.68
COL9A1-201ENST00000320755 POTEB3A0JP26 581 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 POTECB2RU33 542 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 FGFR1OPO95684 399 aaKnown RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 KRT18P05783 430 aaKnown RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 SNHG28P0DPA3 235 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 NOVP48745 357 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 POTEBQ6S5H4 581 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 CCDC84Q86UT8 332 aaPredicted RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 COG1Q8WTW3 980 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 BMP2KQ9NSY1 1161 aaPredicted RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 ZNF219Q9P2Y4 722 aaPredicted RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 hCG_1984214I3L0E3 225 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 ZBTB5O15062 677 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 ZBTB22O15209 634 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 BUB1O43683 1085 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 ADRA2BP18089 450 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 MAGEA1P43355 309 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 FAM26FQ5R3K3 315 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 LRRC55Q6ZSA7 311 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 ZNF713Q8N859 430 aaPredicted RBP19.3■□□□□ 0.68
COL9A1-201ENST00000320755 EHD2Q9NZN4 543 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 PCDHA1Q9Y5I3 950 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 LTBP4Q8N2S1 1624 aa19.3■□□□□ 0.68
COL9A1-201ENST00000320755 A0A1W2PQJ5 194 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 NCK2O43639 380 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 TAL1P17542 331 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-201ENST00000320755 RASSF7Q02833 373 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 TMC4Q7Z404 712 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 KIAA0825Q8IV33 1275 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-201ENST00000320755 DBNDD1Q9H9R9 158 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 TACC1O75410 805 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 HLA-DOAP06340 250 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 IKQ13123 557 aaPredicted RBP19.29■□□□□ 0.68
COL9A1-201ENST00000320755 DNAJC19Q96DA6 116 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
COL9A1-201ENST00000320755 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 SLC1A4P43007 532 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 CKAP4Q07065 602 aaKnown RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 ORC2Q13416 577 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 FIGNQ5HY92 759 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 NFRKBQ6P4R8 1299 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 TXLNBQ8N3L3 684 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 CALCOCO1Q9P1Z2 691 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 TRIM37O94972 964 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 MYBL2P10244 700 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 HOXA10P31260 410 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 EZH2Q15910 746 aaKnown RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 QRICH1Q2TAL8 776 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 TMEM119Q4V9L6 283 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 PPP4R3AQ6IN85 833 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 GPBP1Q86WP2 473 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 CRAMP1Q96RY5 1269 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 TRIM34Q9BYJ4 488 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 MEIS1O00470 390 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 WDR93Q6P2C0 686 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 SP8Q8IXZ3 490 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 RIN2Q8WYP3 895 aaPredicted RBP19.28■□□□□ 0.68
COL9A1-201ENST00000320755 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 SALL4Q9UJQ4 1053 aa19.28■□□□□ 0.68
COL9A1-201ENST00000320755 POLR2FP61218 127 aaKnown RBP19.27■□□□□ 0.68
COL9A1-201ENST00000320755 FKBP3Q00688 224 aaKnown RBP19.27■□□□□ 0.68
COL9A1-201ENST00000320755 USH1GQ495M9 461 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 COL4A3BPQ9Y5P4 624 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 A0A0U1RQG5 324 aaPredicted RBP19.27■□□□□ 0.68
COL9A1-201ENST00000320755 PLA2G4BP0C869 781 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 KCNMA1Q12791 1236 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 TRIM58Q8NG06 486 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 HDAC7Q8WUI4 952 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 TEKT1Q969V4 418 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 TSGA10Q9BZW7 698 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 SH2D4AQ9H788 454 aa19.27■□□□□ 0.68
COL9A1-201ENST00000320755 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 POTEIP0CG38 1075 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 CAPN2P17655 700 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 SLC7A5Q01650 507 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 GPATCH4Q5T3I0 446 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 APOBEC3HQ6NTF7 200 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 POTEGQ6S5H5 508 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 POTEEQ6S8J3 1075 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 LRRC27Q9C0I9 530 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 ATP6V0A2Q9Y487 856 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 JRKLQ9Y4A0 524 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 CDK17Q00537 523 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 COBLL1Q53SF7 1204 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 PRR16Q569H4 304 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 BAP1Q92560 729 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 LSM14BQ9BX40 385 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 SWAP70Q9UH65 585 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 SNX12Q9UMY4 172 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 TUBBP07437 444 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 CLK2P49760 499 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 ZSCAN26Q16670 478 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 SKIDA1Q1XH10 827 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms