RNA–Protein interactions for RNA: ENST00000317370.12

SLC2A4-201, Transcript of solute carrier family 2 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC2A4, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC2A4-201ENST00000317370 MIEF2Q96C03 454 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 SGSM3Q96HU1 749 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 LRP5O75197 1615 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L15C9J2P7 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L13C9JLJ4 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L11C9JVI0 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L18D6R9N7 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L22D6RA61 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L17D6RBQ6 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L19D6RCP7 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L20D6RJB6 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L24Q0WX57 530 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 USP17L6PQ6QN14 398 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 RPSAP08865 295 aaKnown RBP13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 RPAP3Q9H6T3 665 aaPredicted RBP13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
SLC2A4-201ENST00000317370 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 TRPA1O75762 1119 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 MMS19Q96T76 1030 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 SELENOOQ9BVL4 669 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 ATP2C2O75185 946 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 CDC25AP30304 524 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.321e-7■■■■□ 20.9
SLC2A4-201ENST00000317370 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 AGBL1Q96MI9 1066 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 BCORQ6W2J9 1755 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
SLC2A4-201ENST00000317370 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 ENTPD3O75355 529 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 CPA4Q9UI42 421 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 MYCLP12524 364 aaPredicted RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 CLNS1AP54105 237 aaKnown RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 PPFIA1Q13136 1202 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 ANKRD13CQ8N6S4 541 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 ATG4CQ96DT6 458 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 BMP3P12645 472 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 NAA25Q14CX7 972 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 CCL15Q16663 113 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 SH2D3CQ8N5H7 860 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 RUFY1Q96T51 708 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 BMP2KQ9NSY1 1161 aaPredicted RBP13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 KCNH3Q9ULD8 1083 aa13.07□□□□□ -0.32
SLC2A4-201ENST00000317370 AGPSO00116 658 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 CHUKO15111 745 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 AARSP49588 968 aaKnown RBP eCLIP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 CDR1P51861 262 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 USP14P54578 494 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 CEP85LQ5SZL2 805 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 RCSD1Q6JBY9 416 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 TEPSINQ96N21 525 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 PCDHA1Q9Y5I3 950 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 RRP36Q96EU6 259 aaKnown RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 A0A0C4DFX4 3053 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 KIF5BP33176 963 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 PEX19P40855 299 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 TMEM260Q9NX78 707 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
SLC2A4-201ENST00000317370 ZNF76P36508 570 aa13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 EXOSC10Q01780 885 aaKnown RBP13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 IFT88Q13099 833 aa13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
SLC2A4-201ENST00000317370 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms