RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
FOXR1-201ENST00000317011 PHOSPHO2Q8TCD6 241 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
FOXR1-201ENST00000317011 C16orf70Q9BSU1 422 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 BCAS3Q9H6U6 928 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 PCDHA11Q9Y5I1 949 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 KIAA1217Q5T5P2 1943 aa17.98■□□□□ 0.47
FOXR1-201ENST00000317011 CUL9Q8IWT3 2517 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
FOXR1-201ENST00000317011 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
FOXR1-201ENST00000317011 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 MFSD10Q14728 455 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 TRIM71Q2Q1W2 868 aaKnown RBP17.97■□□□□ 0.47
FOXR1-201ENST00000317011 DEFB128Q7Z7B8 93 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 AFAP1L1Q8TED9 768 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
FOXR1-201ENST00000317011 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 MYH6P13533 1939 aa17.97■□□□□ 0.47
FOXR1-201ENST00000317011 PLEKHA8P1O95397 391 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 PARNO95453 639 aaKnown RBP17.96■□□□□ 0.47
FOXR1-201ENST00000317011 GGPS1O95749 300 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 CXCL10P02778 98 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 CALM1P0DP23 149 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 CALM2P0DP24 149 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 CALM3P0DP25 149 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 HOXC8P31273 242 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 HIC1Q14526 733 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 XRRA1Q6P2D8 792 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 TRAF7Q6Q0C0 670 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 FANCBQ8NB91 859 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 ZFP91Q96JP5 570 aaPredicted RBP17.96■□□□□ 0.47
FOXR1-201ENST00000317011 SPATA33Q96N06 139 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 NKX2-4Q9H2Z4 354 aa17.96■□□□□ 0.47
FOXR1-201ENST00000317011 VCANP13611 3396 aa17.96■□□□□ 0.46
FOXR1-201ENST00000317011 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 SELPP16109 830 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 ATP2A2P16615 1042 aaKnown RBP17.95■□□□□ 0.46
FOXR1-201ENST00000317011 RABGGTBP53611 331 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 PTK7Q13308 1070 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 USP17L6PQ6QN14 398 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 SENP7Q9BQF6 1050 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
FOXR1-201ENST00000317011 ANO2Q9NQ90 1003 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
FOXR1-201ENST00000317011 CKBP12277 381 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 ACTN1P12814 892 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 MYOGP15173 224 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 NEDD9Q14511 834 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 PCNX4Q63HM2 1172 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 PIBF1Q8WXW3 757 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 PRDM12Q9H4Q4 367 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 SLC28A3Q9HAS3 691 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 MYO9BQ13459 2157 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 CHD7Q9P2D1 2997 aa17.94■□□□□ 0.46
FOXR1-201ENST00000317011 NBNO60934 754 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 BAIAP3O94812 1187 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 ZNF286BP0CG31 522 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 ZNF200P98182 395 aaPredicted RBP17.93■□□□□ 0.46
FOXR1-201ENST00000317011 GNPTABQ3T906 1256 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 METTL7BQ6UX53 244 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
FOXR1-201ENST00000317011 USP38Q8NB14 1042 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 KCNB2Q92953 911 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 WNT8BQ93098 351 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 RTEL1Q9NZ71 1219 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 TET1Q8NFU7 2136 aa17.93■□□□□ 0.46
FOXR1-201ENST00000317011 ZBBXA8MT70 800 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 H3BRB1 525 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 FIBPO43427 364 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 RXRAP19793 462 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 POU3F3P20264 500 aaPredicted RBP17.92■□□□□ 0.46
FOXR1-201ENST00000317011 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 FUT2Q10981 343 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 LRRC8DQ7L1W4 858 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
FOXR1-201ENST00000317011 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 CUL5Q93034 780 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 GAS2L1Q99501 681 aaPredicted RBP17.92■□□□□ 0.46
FOXR1-201ENST00000317011 GPR20Q99678 358 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 TUT1Q9H6E5 874 aaKnown RBP17.92■□□□□ 0.46
FOXR1-201ENST00000317011 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
FOXR1-201ENST00000317011 SEC63Q9UGP8 760 aaKnown RBP17.92■□□□□ 0.46
FOXR1-201ENST00000317011 LGALS2P05162 132 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms