RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TGFB3P10600 412 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 ATP2B1P20020 1258 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 MTMR1Q13613 665 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 PRR16Q569H4 304 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 PLA2G4DQ86XP0 818 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 SCFD2Q8WU76 684 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 DDX25Q9UHL0 483 aaKnown RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 ZHX1Q9UKY1 873 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 PCDHB6Q9Y5E3 794 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 MSH4O15457 936 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 ARIH2O95376 493 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 MCM7P33993 719 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 ZNF174Q15697 407 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 USP28Q96RU2 1077 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 MRVI1Q9Y6F6 885 aa14.35□□□□□ -0.11
CHMP2A-201ENST00000312547 TBX3O15119 743 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 NEMFO60524 1076 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ATP9AO75110 1047 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 KCNA2P16389 499 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ADCYAP1R1P41586 468 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 SP2Q02086 613 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 PTPAQ15257 358 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 CCDC144BQ3MJ40 725 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 IQSEC1Q6DN90 963 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 SH3TC2Q8TF17 1288 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 HAS1Q92839 578 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 SLC5A5Q92911 643 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ARMC5Q96C12 935 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 SENP7Q9BQF6 1050 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 FTOQ9C0B1 505 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 MORC2Q9Y6X9 1032 aaPredicted RBP14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
CHMP2A-201ENST00000312547 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 IPO5O00410 1097 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 DHX15O43143 795 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 SEPT4O43236 478 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 ADCY6O43306 1168 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 BMP15O95972 392 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 TXNP10599 105 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 SMPD1P17405 629 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 NASPP49321 788 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 DUSP28Q4G0W2 176 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 ANO1Q5XXA6 986 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 FAM20AQ96MK3 541 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 GNEQ9Y223 722 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 CLIC4Q9Y696 253 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 HTTP42858 3142 aa14.33□□□□□ -0.12
CHMP2A-201ENST00000312547 LAD1O00515 517 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 NKRFO15226 690 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 AKR1A1P14550 325 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 TNFAIP2Q03169 654 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 PTGDRQ13258 359 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 CALCRLQ16602 461 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 LY6KQ17RY6 165 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 FOXD4L6Q3SYB3 417 aaPredicted RBP14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 B3GNT9Q6UX72 402 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 FOXD4L3Q6VB84 417 aaPredicted RBP14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 ZNF333Q96JL9 665 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 CHAMP1Q96JM3 812 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 RIT2Q99578 217 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 ZNF577Q9BSK1 485 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 NFASCO94856 1347 aa14.32□□□□□ -0.12
CHMP2A-201ENST00000312547 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 PSMD10O75832 226 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 OR52Z1P0C646 297 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 PTGS1P23219 599 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 PRPHP41219 470 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 ARHGAP1Q07960 439 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 NEDD9Q14511 834 aa14.31□□□□□ -0.12
CHMP2A-201ENST00000312547 SLC39A14Q15043 492 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms