RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 MED4Q9NPJ6 270 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 SCINQ9Y6U3 715 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 KDM5BQ9UGL1 1544 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 AOX1Q06278 1338 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 VAMP4O75379 141 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 BPIFB4P59827 614 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 FLOT2Q14254 428 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 NAA35Q5VZE5 725 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ATG16L1Q676U5 607 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 TTC23LQ6PF05 361 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 KBTBD3Q8NAB2 608 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ZBTB40Q9NUA8 1239 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 MSH2P43246 934 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 CAPZA2P47755 286 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 TLK1Q9UKI8 766 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ARIH2O95376 493 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 CCND2P30279 289 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 MESDQ14696 234 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 C2orf69Q8N8R5 385 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 PBXIP1Q96AQ6 731 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ZRANB2O95218 330 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 DCAF4L1Q3SXM0 396 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ARL13BQ3SXY8 428 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 ABTB1Q969K4 478 aaPredicted RBP13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 KIF17Q9P2E2 1029 aa13.9□□□□□ -0.18
SPTBN2-201ENST00000309996 MYO1FO00160 1098 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 ADAM9Q13443 819 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 E4F1Q66K89 784 aaPredicted RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 PPARAQ07869 468 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 RPAINQ86UA6 219 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 EXT2Q93063 718 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 E7EWF7 191 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 ZSCAN9O15535 394 aaPredicted RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 MFAP3P55082 362 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 GADD45BO75293 160 aaPredicted RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 GNAT1P11488 350 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 KCTD6Q8NC69 237 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 MAGOHBQ96A72 148 aaKnown RBP13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 EFCAB8A8MWE9 144 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 PAMP19021 973 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 IFNAR2P48551 515 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 ANP32DO95626 131 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 TRIM11Q96F44 468 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
SPTBN2-201ENST00000309996 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 JAK2O60674 1132 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 IFT43Q96FT9 208 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 TOM1L1O75674 476 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 MARK3P27448 753 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 RASSF7Q02833 373 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 GRIN1Q05586 938 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 CCDC85BQ15834 202 aaPredicted RBP13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 COA7Q96BR5 231 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 APOA4P06727 396 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 MAPK4P31152 587 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 ARL4AP40617 200 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 IFT88Q13099 833 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 KCTD16Q68DU8 428 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 NCLNQ969V3 563 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
SPTBN2-201ENST00000309996 SNX2O60749 519 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms