RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KAT6AQ92794 2004 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 RGS20O76081 388 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GGPS1O95749 300 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ASGR1P07306 291 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 UBA1P22314 1058 aaKnown RBP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ICAM3P32942 547 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ACLYP53396 1101 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 NEDD9Q14511 834 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 UBE2Q1Q7Z7E8 422 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GIMAP8Q8ND71 665 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 COPS5Q92905 334 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GLT1D1Q96MS3 346 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 STARD7Q9NQZ5 370 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 A0A1W2PQY0 241 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MAFGO15525 162 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SORBS3O60504 671 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CABYRO75952 493 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MMP1P03956 469 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MYL3P08590 195 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PTGS1P23219 599 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NKX3-2P78367 333 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 LAMC2Q13753 1193 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CEP55Q53EZ4 464 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TMEM63BQ5T3F8 832 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DPF3Q92784 378 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TCEAL9Q9UHQ7 104 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 UBIAD1Q9Y5Z9 338 aa12.52□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 KPNA6O60684 536 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MMP3P08254 477 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CYP3A4P08684 503 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 COL6A1P12109 1028 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ITGB5P18084 799 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ARHGAP1Q07960 439 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 KRT40Q6A162 431 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 A6NJR5 290 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 M0R2N6 131 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CTAGE5O15320 804 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 EVI5O60447 810 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 GJB2P29033 226 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 USP11P51784 963 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 GUCY1B3Q02153 619 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SP4Q02446 784 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NPY5RQ15761 445 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DGKDQ16760 1214 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CYFIP1Q7L576 1253 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NAP1L4Q99733 375 aaKnown RBP12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 KATNAL1Q9BW62 490 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ELP1O95163 1332 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 H3BQV1 296 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 KCNA2P16389 499 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CIITAP33076 1130 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 RTP1P59025 263 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms