RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 VWA5AO00534 786 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 ATP2A1O14983 1001 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 PSMD10O75832 226 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLP1-201ENST00000302731 CCNE1P24864 410 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 DSG3P32926 999 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 LRMPQ12912 555 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 DDX12PQ92771 950 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 GJA10Q969M2 543 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 DCPSQ96C86 337 aaKnown RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 THAP9Q9H5L6 903 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
CLP1-201ENST00000302731 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 RBBP6Q7Z6E9 1792 aaKnown RBP11.84□□□□□ -0.51
CLP1-201ENST00000302731 MED24O75448 989 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLP1-201ENST00000302731 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 CCZ1BP86790 482 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 STK4Q13043 487 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 COG2Q14746 738 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 CATSPER3Q86XQ3 398 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 GUF1Q8N442 669 aaKnown RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 CCDC112Q8NEF3 446 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 REPS2Q8NFH8 660 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 CYP2W1Q8TAV3 490 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 P2RX5Q93086 422 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 RIT2Q99578 217 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 RAVER2Q9HCJ3 691 aaKnown RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
CLP1-201ENST00000302731 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
CLP1-201ENST00000302731 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 POTECB2RU33 542 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 NFIBO00712 420 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
CLP1-201ENST00000302731 SKILP12757 684 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 ALAS1P13196 640 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 PBX1P40424 430 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 STAT3P40763 770 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 HMGCS2P54868 508 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 TCP11X2Q5H9J9 407 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 LRCH2Q5VUJ6 765 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 PCNX4Q63HM2 1172 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
CLP1-201ENST00000302731 B3GNT9Q6UX72 402 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 CATSPERGQ6ZRH7 1159 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
CLP1-201ENST00000302731 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
CLP1-201ENST00000302731 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 DNM3Q9UQ16 869 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 RLFQ13129 1914 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 FRMD3A2A2Y4 597 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 E9PMD0 336 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 KIF20AO95235 890 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 FCER1AP12319 257 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 SLC12A3P55017 1021 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 DGKZQ13574 1117 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 ARID5BQ14865 1188 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 CCDC65Q8IXS2 484 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 SYT2Q8N9I0 419 aaPredicted RBP11.82□□□□□ -0.52
CLP1-201ENST00000302731 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 HSD17B14Q9BPX1 270 aa11.82□□□□□ -0.52
CLP1-201ENST00000302731 EIF2AK1Q9BQI3 630 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms