RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ANKRD42Q8N9B4 389 aa15.82■□□□□ 0.12
CDT1-201ENST00000301019 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
CDT1-201ENST00000301019 CAMTA1Q9Y6Y1 1673 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 AMOTQ4VCS5 1084 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 GDAP1Q8TB36 358 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
CDT1-201ENST00000301019 USH1CQ9Y6N9 552 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 A6NNZ2 444 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 MINDY4BA8MYZ0 360 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
CDT1-201ENST00000301019 ITGA6P23229 1130 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 TUBB8Q3ZCM7 444 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 SHISA4Q96DD7 197 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 OCEL1Q9H607 264 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDT1-201ENST00000301019 FCER1AP12319 257 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 TMEM154Q6P9G4 183 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 TRPM8Q7Z2W7 1104 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 XPO6Q96QU8 1125 aaKnown RBP15.81■□□□□ 0.12
CDT1-201ENST00000301019 SYT15Q9BQS2 421 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 TRIM51Q9BSJ1 452 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 CEP126Q9P2H0 1117 aa15.81■□□□□ 0.12
CDT1-201ENST00000301019 ATXN2Q99700 1313 aaKnown RBP15.8■□□□□ 0.12
CDT1-201ENST00000301019 PXDNLA1KZ92 1463 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 ATP2A2P16615 1042 aaKnown RBP15.8■□□□□ 0.12
CDT1-201ENST00000301019 FECHP22830 423 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 DRP2Q13474 957 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 CNBD1Q8NA66 436 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 IGDCC4Q8TDY8 1250 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 RAPGEF4Q8WZA2 1011 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 TRIM4Q9C037 500 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 NDST4Q9H3R1 872 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 LNPEPQ9UIQ6 1025 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 ABCA3Q99758 1704 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 LMO7Q8WWI1 1683 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 ANKRD33BA6NCL7 494 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 PDIA6Q15084 440 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 HELBQ8NG08 1087 aaPredicted RBP15.8■□□□□ 0.12
CDT1-201ENST00000301019 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
CDT1-201ENST00000301019 NOX5Q96PH1 765 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 BATF3Q9NR55 127 aa15.8■□□□□ 0.12
CDT1-201ENST00000301019 METTL5Q9NRN9 209 aaKnown RBP15.8■□□□□ 0.12
CDT1-201ENST00000301019 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 NQO1P15559 274 aaKnown RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 MIGA1Q8NAN2 632 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 L3MBTL3Q96JM7 780 aaPredicted RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 TMEM237Q96Q45 408 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 DDX50Q9BQ39 737 aaKnown RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 GDF3Q9NR23 364 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 FGFR1OP2Q9NVK5 253 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 RFX7Q2KHR2 1363 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 KLRC1P26715 233 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 UCMAQ8WVF2 138 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 DBR1Q9UK59 544 aaKnown RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 NPHP3-ACAD11A0A0J9YXS1 232 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 TTI1O43156 1089 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 RTN3O95197 1032 aaPredicted RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 RAD23BP54727 409 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 ZBED6P86452 979 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 TMEM62Q0P6H9 643 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 ARPP21Q9UBL0 812 aaPredicted RBP15.79■□□□□ 0.12
CDT1-201ENST00000301019 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
CDT1-201ENST00000301019 LRRC10BA6NIK2 292 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 DNAJC8O75937 253 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 HHATQ5VTY9 493 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 PSMD1Q99460 953 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 METTL22Q9BUU2 404 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 ARMT1Q9H993 441 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 RHBDL2Q9NX52 303 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 ADAMTS1Q9UHI8 967 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 CORO1CQ9ULV4 474 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 WDR17Q8IZU2 1322 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 GOLGA6L10A0A0M3HER8 536 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 ERICH2A1L162 156 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 ETS2P15036 469 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 BLMHQ13867 455 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 TTC38Q5R3I4 469 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 RFX8Q6ZV50 586 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 CCDC25Q86WR0 208 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 NAPBQ9H115 298 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 IQSEC3Q9UPP2 1182 aaPredicted RBP15.78■□□□□ 0.12
CDT1-201ENST00000301019 SUGT1Q9Y2Z0 365 aa15.78■□□□□ 0.12
CDT1-201ENST00000301019 ORC4O43929 436 aa15.77■□□□□ 0.12
CDT1-201ENST00000301019 PLEKHA8P1O95397 391 aa15.77■□□□□ 0.12
CDT1-201ENST00000301019 DNM2P50570 870 aa15.77■□□□□ 0.12
CDT1-201ENST00000301019 CWF19L1Q69YN2 538 aaKnown RBP15.77■□□□□ 0.12
CDT1-201ENST00000301019 PHC3Q8NDX5 983 aa15.77■□□□□ 0.12
CDT1-201ENST00000301019 ZNF507Q8TCN5 953 aa15.77■□□□□ 0.12
CDT1-201ENST00000301019 APPBP2Q92624 585 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms